Gene Nham_0728 details

Gene Information

• Locus tag: Nham_0728
• ID: 4031488
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 808461
• End bp: 808889
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637969260
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_576071
• Protein GI: 92116342
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins
• TIGRFAM ID: [TIGR02805] tonB-system energizer ExbB, group 2

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.123045
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTTG AGTGGCTCTC TGATGCTGTT GATTTTGGCG TCATCGGACT TCTTGTTTTG 
CTCAGCGTCA TCGTCGTCGC TATCGGCCTT GAACGGATGT TCTTTTATCG CTCCATCGAT 
ACAGCCGGTT TTACCAACAT CAAAGCGCTT GAGCTGGAAT TGACCAAGCG GCTGCTCGTC 
GTCGCCTCGG TCGCCTCCAA CGCGCCCTAT ATCGGTTTGC TGGGGACGGT GCTCGGCATC 
ATGCTGACAT TCTACAACAT GAGCCTCGAC GCTGCGGCGG ATGTAACCAA GATCATGCTG 
GGGCTCGCGC TCGCGCTGAA GGCGACGGCC GTCGGCCTGG TCGTGGCCCT GATCTCGGTG 
GCGATCTACA ACGCGTTGCT GCGCAAGGTC AAGGTGCTGA TGCTTCGATG GGAGATCGCC 
CGTGGATGA 

 

Protein sequence

MQFEWLSDAV DFGVIGLLVL LSVIVVAIGL ERMFFYRSID TAGFTNIKAL ELELTKRLLV 
VASVASNAPY IGLLGTVLGI MLTFYNMSLD AAADVTKIML GLALALKATA VGLVVALISV 
AIYNALLRKV KVLMLRWEIA RG