Gene Nham_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0725 
Symbol 
ID4031524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp798624 
End bp805628 
Gene Length7005 bp 
Protein Length2334 aa 
Translation table11 
GC content59% 
IMG OID637969257 
Productfilamentous haemagglutinin-like protein 
Protein accessionYP_576068 
Protein GI92116339 
COG category 
COG ID 
TIGRFAM ID[TIGR01901] filamentous haemagglutinin family N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA TCGCTGCGGA CTCGATGCGC GCGCATGATT GTGCCGCGGC TCAGTTATAC 
GTGAAGCGCC TGCCTTCTCC GTTCTCGCTC AGGTTCTTTA GGACATCCCT ATTGGTCACG
ACGGCGGTTT GCGCCGTGAT GGTATTGCCA CATGCGGCGT CGGCGCAGAG CCCGACTGGC
GGTTCCGTTG TCGCGGGCTC GGCCGGCATC GCGCAGGCGG GCACGGTCAC CAACATCAAC
CAATCCTCGC AGAAAGCCGT CATCAACTGG CAGGGCTTCT CGGTCGGCGC GCAGAACACC
GTCAATTTCA ACCAGCCGAA CAGTTCGGCT GCAACCCTCA ACCGCGTCAT CGGCAACGAG
AGCAGCGTCA TCAATGGCGC CATCAACGCC AACGGTCAGG TCTTCATCGT CAATTCAAAT
GGCGTGCTGT TCGGCCAGGG CGCGCAAGTC AATGTCGGCG GCCTCGTCGC CTCGACGCTG
GATATCTCCA ACAATGACTT CATGGCCGGG AACTACAAAT TCTCGGGCAC ATCGAATGCG
TCGGTCGTCA ACCAGGGCCG CATCCGCACG CATGGCGGGG GTTATGTGGC GCTGCTCGGC
AAGACGGTGT CGAACGAGGG CATGATCGCG GCCAAGCTCG GCACGGTGGC GATGGCGGCC
GGCGACAAGA TCACATTGAA CTTCGGCGGC GATTCGCTGC TGGATGTGAC GATCGACAAG
GGCACGCTGA ACGCGCTGGT GCAGAACAAG CGCGCGATCA TCGCCAATGG CGGGCAGGTG
ATCATGACGG CGAAGGCGGC CGATCAGGTC TTGTCGGCGC AGGTCAACAA TTCCGGCATC
ATCCAGGCCC GCACCATGGC GGCGCTGAAG GGGGGCTCCA ACGGCGGCAC CGTGAAGCTC
GGCAAGATCA AGCTGCTGGC GCAGGGCGGC ACCGCCAAGG TCTCCGGCAA GCTCGACGCC
TCCGCTCCAA AAGGCGGCGA CGGCGGCTTC ATCGAGACGA GCGGCGATCA CGTCAAGATC
GCGGACGATG CGGTGATCAC CACCAACTCC GTCTATGGCA AAACCGGCAC ATGGCTGGTC
GACCCGACGG ATTTCCATAT TGTTTATGGC AGCGGCGCTC AAACCACGAG CGGTATCGGC
GTGAATACGT TGTTAGCGAG GCTCACTGAC AACAATGTCA CTATTGTCAC CTCAGCGAGT
GGCAGCGAAA GTGGCGATAT TGATGTCGAG GCTCCGCTCA CGTGGACTTC GGGCAATTCG
TTGACGCTCG GTGCTGCCAA CAATATCAAC ATCAATGCGC CGATGACCTG GTCGGGAACG
CTGACGTTGA ATGCGGGGAA AAACATCTTC GTCAACGCGG CAGTGACGGC CTGCGCGCCC
ACGGTTTGCG CTTTCACCAC ACCAAGTCTG GTCGCGCATT ACGGCCACGA CATCAATCTC
GTCGACGGCT CGGCATTGGC TACGTTGACC GCCGGCAAAA ATGACAATGG CTCCGCTTAT
GGCCTCTACA CATCTCTTGG CCTTGCGAAC GGGACTTTTG GCGGGTCGAT CACGCTTGGC
AGCACGAATT CCGTCAAGCT GAATGATGAC ACCTATACGG TCATTACCGA CACGGCAGGC
CTGAATGCTG TTAAAAATAA TCTGTCAGGT CACTATGTGG TTGGCGCCAA TTTCGACATC
ACGGATATCA ACTGGAACGA GGGTATTGGC TCTTCCGCGG ATTTTACCGG AAGCTTCAAT
GGATTTGGTC ACAGGATTAC CGCATCCACA TTAACCGGAA CCGGATTATT TGGCACGATC
GGCGCGGGCG CGTCAGTAGC CAATGTTGCG ATCGGAGGAA CTGGCTCCGT TCCGGCCACG
GTGAACGTGC CTGCCAGTAA CGGCGTCGCC GATGCTGTCG GCGTCCTGGC CAATGTCAAC
CGAGGTCAGA TTGTCAATAG TTTCGCGAAT TATGTAACGA TCAATAATGC AACGGTCGGC
GGGGTTGCTG CGATCGACAA GGTCGGAGGA TTAGTCGGCA TCAACGGCGA TCCCGTCGCC
AAAGATGGTT TGATCTCCAA CAGCTATGTC GCCAACCTTG GCTTAACCGC CGGGCACGTT
GCCGGCGGTT TGGTTGGCGT CAACAATGGC GAGATCACAG AGAGCTTTGC GCAGGGAGGT
ACGCTAAGTT ACATCATAGC GGGAAGCGCC GGCACTGTTA CCGATGTCGG CGGCTTGGTC
GGCATCAACA ACAATACGAC TTCCACGTCT TTTAGCTCGA TGATAATGCG CCTCGAGTCG
TCCATCGCCA CCACGGCGGC GGTCGGTGGC TTCGTCGGGA CGAACACAGG AACGATCGAT
CAATCCTATA CGCGTATGGT GAGCACTTCG GCCACGACGT ATAGCTATGG CGACGAACTT
GCGGGTTTCG TCGGCAACAA CGCTTCAACC GGCGCGATAA CCAATTCCTA TGCCGATCTT
TATTATACGA GCACTAATGC TGCAGCCAAT TGGAGCGCAG GCTTTGCTTA CACTAACGCG
GGCAGCATCA AATATGCTTA TGCAACCACT TATGCGGGCA GCACGGCGCC TCGGTCCGGT
TTTGTTGCCT CCAACACGGG CAGCGTTTTA AACTCCTATT GGTATGCCGA TGGCGTAACC
AACTTTGCTG TCACTGACAA TTCCGGCGCA ACCAAGTTCT CCGGCGCAGA CCAGTCCGCC
GCGGCAGCAG CCGCCACGAC TTTCGCAAAT TATGTCGGCT TCGATCCCAC GATTTGGGGA
GCCTCGTCTA CGGGCATTCC GGTTCTCTCT AACCTCCCGC TATATGCCGG CGCTACTAAT
AAGTCGTATG GCGCGGTGAC CTCACCCAGT ACGCTTGCGG CACAAGCCGT TGGCATACAA
GGGGCGTTCG GCGGAACAGA CAACTTCCGA GACAACGTCT TTTTTGGCGT TACTCTCTCA
GACGGGTATG TCGACGCTGG CTACCGGCTG ACATCGGATG TGTTGTTTTC TACAACCTCG
GCTTACAAGG TCATTCGCGG CGTAGTTCAA ATTAATCCCA GGTCGCTCTC GATAGGCACG
ACGATTACGG CCGCGGACAA GACGTATGAC GGGACGGCGG CAGTTACGAA CCTATCGAGC
GGCGCCATGA CGCTGACGGG GTTCGTGGCA GGCCAGTCGC TCACCATCAG CAATCTGACC
GGCACGTTCC TCGACAAGAA TGTGGGAGCC AACAAGACCA TCACACTGAC TTATGACGCC
GCTGCGGGCG CTGGCACGAA GGCCAGCAAC TACATCATCA CGGCAGGCAG CGTGCCGAAG
GCCTCGATCA CGGCCCGGAC GCTGACCGTC TCGCAAGCAA CTGTCGATAA CAAGGTCTAC
GACGGCACCA CCGCAGCCTC ACTCGTGTCT TTAGGATGGA GTGGCTTGGT GGCCGGCGAC
ACGATAACGG CCGCCGGAAT TGCGAATTTT GCCAATGCCA ACGCCGGGAC CAACAAGAGC
GTTAACGTCA GCGGCCTTGT CCTGACGAAC GCGAGCGCTG TCAACTACAC GCTTTCTGCG
ACAAGCGGGA CTGTTCCCTC CACCGCGGAA ATTAGTCCCC GTGTGCTGAT TCTGTCCGGC
GCCAAATTGG AGGACAACAC GACGACGGTG GCCGGGGCCA ATCTGGTTGC GACCAATCTG
GCCGCTGGCG ATAGCATTAC GTTCCTCGGC ACGGCGACGA TTGCCTCTGC GAGCCCGGGA
CTTCAAGACA TCACAAGCAC GACTGGCCTC CATCCGACTA ATGGAAATTA CGTGCTCAAT
GGCGTGTGCA ATCTTGGCGC GTGCGGTTCT GTGCTGGTCA GTTCCGCCAG CCGGGTGGTC
TCATCTAAAC CGGGTACGGT CACGGTCGTC GACACAGGCT TGACGGCTAC CATCACCCAG
ACCACTGATC GGGCGATCAT CGACTGGTTT CGATTCTCGA TCGCCTCTGG CGAGACGGTG
ACTTTCAATC AGCCGTCGTC CACCGCCGTC ATTCTCAATC GCGTCACCGG CAGCGATCAG
AGCATTATCA GCGGCGCGCT CAATGCCAAC GGCCGGGTGT TCATCGTCAA TTCGGCCGGC
GTTATTTTCA ACGCGGGCTC GCAGGTTAAC GTCGGCGGCC TCGTCGCAAG TACCCTTGCG
ATCACCAATA GCGACTTCAG CGCGGGCAAT TACAGTTTCA GCAGCCCCGG TGGCAGTATC
GGGCCGGTTG CGGCCGCCGG GAATATCTCG GTCGGTAATG GCAGCTTCGT CGCTTTGCTG
GGCGCCAGCA ACGTCGGCAA CACAGGCCGC ATCACGGCCA CGAATGGCAA GGTCATCCTT
GCCTCTGTGA CAGATGCGAA TCTTGTGCTT AACGGCGCGG GCCCCGCTCT TGATAGCTAC
ACGTTGAACG GCGCGGCGGC GACGGCCACG GCGAGCGGCA CGATCGTCGT GACCAACGGG
GTGCTGGAGA CAGCCGGTCG CAGCATGACG ATCTCCGGCC TCTCGCTTGA TACTATCGGC
GGCGGCACGT GGTCATGGTC TCAGAACGCG ATCAGCGTCG GTGGCGTCGA CCTCGCGCCG
GCTTTCGTCG CGACACAGCT CGGTCTGCGC AACTTCAGCC TCAATGCGCT TTCTGGCGAT
GTCACGATCA ACGCCGCGAT AAACTGGTCT GCAAATACGC GGCTGACGTT GGCGGCCTCA
GGAGCCGTCA ACATCAATGC GCCGGTGACC GCGACCGGCG CAAATGCAGC GCTGGCGATG
AACTACGGCA CCGATTACAC TCTCTGGACG CCGACGAGCT ATGCAGGAGC GGTGCTGAAT
GCGGACGGCC TTCCCGTCGC GCAGATAGCG CCGGCCGGTG CCATTTATGG CTCCATCACC
CTGTCGGGAA ATAACGCTGG CCTCACCGTC AACGGGCAGG CCTACACGCT CATCCACAAC
ATGGCGGATC TCGCTGCCAT TAATGGTTCA TCGACGCACT ATGCGCTCGC TGGCGATCTT
GACGCGAGCG GGACAACTTA TACGACGACG GTTGCCGGCG TGCCGCCTGC GCTCCCCTCT
CAACCTGTTT CAGGAAGCTC CGGTTTTGTT GTCGGTAGCT TCTACGGTGC TCTGGCAGGT
CTCGGCCACA AGATCGACGG TTTGAAAATT CAAGGCGAGA CGAGCACACA GTATACGGGC
GGGCTCATCG GAACCCTGGG CAGGAATGGG ATGATCAGAG ATCTCGGCCT GACCAATGTC
AGCGCTACGA TCTCTCTTCC CGACTCCTAC TTCGATGCAC CTAATTTTGG CCTCGCTCCC
TATTTGGGCG CTCTGGTAGG CCAGATCGGA AATTTGCCAG GCGGAAACGG CTCCCCGACT
GACATGGCGA CCGTAAGGGG TGCTTACGTC ACCGGTGGGG TGACGGTTCT TTCGGGACAC
CGGGCAACGG CGGCGGGAAT GATTGGTTGG GCCAATCAGG CCGCTATCGA TCATGTCTCG
ACAAATGTCT TGCTGGTTTC CGATGGAATA GGTGCAGGCC TGCTCGGGTC TGCCACAGGT
AAGGTCACGA TATCCAAAGC CGATGCGAAA GGTGACGTGA CGTGCGGGAG CGCCGAATGC
GGCGGGCTGA TCGCCGACAT CTCGGAGAGC TCCCTAAGCT ACAGCTATGC CACCGGAGCG
GTCAAAAAGC CGAATGGTTC TCTAGGAGTA TCAGGAGGTC TGATCGGTGC GACAGCGACG
GGTAATAACG GTGTCAGTGT CAGTGTCACC AATTCCTTTG CCACCGGCGC GGTCACGAAC
GGTGGAGTGC TTGGCGGTCT TGTTGGTCAG GTCGACGGTA CAAACGGCGC CACTTTCGAC
AACGTTTATG CGACGGGCGA TGTTGTCGCG CATAACGCTA GCACTCCCAG CGGATTCCTC
GGCGGTCTGA TCGGTTCGGG GACTGCTTTG GGGACAGGGG TTATCCAGAT CGACAAGGCG
TTTGCGCTAG GCAATGTCAC GTTGGATCTG GGTGGAAACA TACCAAGCCA ACAGATTTTT
ACGGCTGTTG GAGGTTTGGT CGGCCAGCTC GTTGGAACCT CAGTTCATAG CTCGATTACC
CACTCTTTTG CCACCGGGGC GGTTTATGCA CCAGAAGCCT TCAATGTCGG CGGGTTTGCC
GGTTGGCTGC AAAATGTAGA TATCTCGGAG TCGTACTCAA CCGGCGCGGT GACCGGCTAT
AATGGTGTAG GTGGATTTGC CGGACTCTAT AACACTGGGA CTATTTTCAA GAGCTATTCC
TCCGGCCCCG TTACAAGCCT GATAGCTCCA GGCCTTGGAG CGTTGAATGG CGCATTCATC
GCCCAGGGTA CAGGTCTCAC CTTTGGTGCG GATGTCCACT ATAGCACAGC CGTTTTCGGT
CCCACGACAG TTAACGGCGC CTTGGGAAAT GCACAATTTT CGACTGGCAA CAGCAACCTG
GAATCCGTTA CGGGTATGAC CACCGCGCAA ATGGTGGCAG CGGGGATGGT GACATCCGGA
ACGGCGGTCG CTCCTAATAC AGCCGCGATC ACGGGCACTT CGCCTGGCCA GGTTGCAGCG
GGTCAGGCGG CGGCGCAGGC GGCGGCTCAA GCCGCAGCGC AGGCCGCCGC CGAAGCTGCT
GCTGCGCAGG CTGCCGCGAC GCAGGCTGCT GCTGCCCGCC AGGCTCTGAT CCAGCAGGGA
GGCCGCACGG CGAACGCGGT CACAAACGGT GTGCAGATGT CATCTGTGAC GCCGCCAGAT
CCCGCGATGT CGGAGGCCGG CGCGTCGGCC GTCAAGACCG CGAAGATCGA GACGATCGAC
AACGAACTCA AGGCCGTCGA TGACAAGGCG AAAGCCGATG ATGATCGGCG CAAGCGCGAG
CGCGAGCGCC GCCGCACCGC GCAGACCAAC CGCCGCGGCC ACGCGGGGGG CGGAACCGGC
GGAGGCCTCG GCGCCACCAT CCGCTCGATC GACGTCAACG GTCAGCGTTT CAATCTGGAG
AACGGCGCTC CGAAGCAGGG CGCGCCGGCT CAGGCGCCTC AATGA
 
Protein sequence
MFDIAADSMR AHDCAAAQLY VKRLPSPFSL RFFRTSLLVT TAVCAVMVLP HAASAQSPTG 
GSVVAGSAGI AQAGTVTNIN QSSQKAVINW QGFSVGAQNT VNFNQPNSSA ATLNRVIGNE
SSVINGAINA NGQVFIVNSN GVLFGQGAQV NVGGLVASTL DISNNDFMAG NYKFSGTSNA
SVVNQGRIRT HGGGYVALLG KTVSNEGMIA AKLGTVAMAA GDKITLNFGG DSLLDVTIDK
GTLNALVQNK RAIIANGGQV IMTAKAADQV LSAQVNNSGI IQARTMAALK GGSNGGTVKL
GKIKLLAQGG TAKVSGKLDA SAPKGGDGGF IETSGDHVKI ADDAVITTNS VYGKTGTWLV
DPTDFHIVYG SGAQTTSGIG VNTLLARLTD NNVTIVTSAS GSESGDIDVE APLTWTSGNS
LTLGAANNIN INAPMTWSGT LTLNAGKNIF VNAAVTACAP TVCAFTTPSL VAHYGHDINL
VDGSALATLT AGKNDNGSAY GLYTSLGLAN GTFGGSITLG STNSVKLNDD TYTVITDTAG
LNAVKNNLSG HYVVGANFDI TDINWNEGIG SSADFTGSFN GFGHRITAST LTGTGLFGTI
GAGASVANVA IGGTGSVPAT VNVPASNGVA DAVGVLANVN RGQIVNSFAN YVTINNATVG
GVAAIDKVGG LVGINGDPVA KDGLISNSYV ANLGLTAGHV AGGLVGVNNG EITESFAQGG
TLSYIIAGSA GTVTDVGGLV GINNNTTSTS FSSMIMRLES SIATTAAVGG FVGTNTGTID
QSYTRMVSTS ATTYSYGDEL AGFVGNNAST GAITNSYADL YYTSTNAAAN WSAGFAYTNA
GSIKYAYATT YAGSTAPRSG FVASNTGSVL NSYWYADGVT NFAVTDNSGA TKFSGADQSA
AAAAATTFAN YVGFDPTIWG ASSTGIPVLS NLPLYAGATN KSYGAVTSPS TLAAQAVGIQ
GAFGGTDNFR DNVFFGVTLS DGYVDAGYRL TSDVLFSTTS AYKVIRGVVQ INPRSLSIGT
TITAADKTYD GTAAVTNLSS GAMTLTGFVA GQSLTISNLT GTFLDKNVGA NKTITLTYDA
AAGAGTKASN YIITAGSVPK ASITARTLTV SQATVDNKVY DGTTAASLVS LGWSGLVAGD
TITAAGIANF ANANAGTNKS VNVSGLVLTN ASAVNYTLSA TSGTVPSTAE ISPRVLILSG
AKLEDNTTTV AGANLVATNL AAGDSITFLG TATIASASPG LQDITSTTGL HPTNGNYVLN
GVCNLGACGS VLVSSASRVV SSKPGTVTVV DTGLTATITQ TTDRAIIDWF RFSIASGETV
TFNQPSSTAV ILNRVTGSDQ SIISGALNAN GRVFIVNSAG VIFNAGSQVN VGGLVASTLA
ITNSDFSAGN YSFSSPGGSI GPVAAAGNIS VGNGSFVALL GASNVGNTGR ITATNGKVIL
ASVTDANLVL NGAGPALDSY TLNGAAATAT ASGTIVVTNG VLETAGRSMT ISGLSLDTIG
GGTWSWSQNA ISVGGVDLAP AFVATQLGLR NFSLNALSGD VTINAAINWS ANTRLTLAAS
GAVNINAPVT ATGANAALAM NYGTDYTLWT PTSYAGAVLN ADGLPVAQIA PAGAIYGSIT
LSGNNAGLTV NGQAYTLIHN MADLAAINGS STHYALAGDL DASGTTYTTT VAGVPPALPS
QPVSGSSGFV VGSFYGALAG LGHKIDGLKI QGETSTQYTG GLIGTLGRNG MIRDLGLTNV
SATISLPDSY FDAPNFGLAP YLGALVGQIG NLPGGNGSPT DMATVRGAYV TGGVTVLSGH
RATAAGMIGW ANQAAIDHVS TNVLLVSDGI GAGLLGSATG KVTISKADAK GDVTCGSAEC
GGLIADISES SLSYSYATGA VKKPNGSLGV SGGLIGATAT GNNGVSVSVT NSFATGAVTN
GGVLGGLVGQ VDGTNGATFD NVYATGDVVA HNASTPSGFL GGLIGSGTAL GTGVIQIDKA
FALGNVTLDL GGNIPSQQIF TAVGGLVGQL VGTSVHSSIT HSFATGAVYA PEAFNVGGFA
GWLQNVDISE SYSTGAVTGY NGVGGFAGLY NTGTIFKSYS SGPVTSLIAP GLGALNGAFI
AQGTGLTFGA DVHYSTAVFG PTTVNGALGN AQFSTGNSNL ESVTGMTTAQ MVAAGMVTSG
TAVAPNTAAI TGTSPGQVAA GQAAAQAAAQ AAAQAAAEAA AAQAAATQAA AARQALIQQG
GRTANAVTNG VQMSSVTPPD PAMSEAGASA VKTAKIETID NELKAVDDKA KADDDRRKRE
RERRRTAQTN RRGHAGGGTG GGLGATIRSI DVNGQRFNLE NGAPKQGAPA QAPQ