| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0711 |
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| Symbol | |
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| ID | 4031510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 784052 |
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| End bp | 785200 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637969245 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_576056 |
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| Protein GI | 92116327 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.577453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGGG CTCCATTTCC AATGATTGGC TTATTGCTGG CCAGCTTGCT TGCCGGTTGC
GACGCCAAAC CGGCGGCGAG CACCAATCCT CCTCCGCTGC CATCCGTCAC CGTTTCGAAA
CCAATTCAGA AGTCGGTTAC CGAATGGGAT GAATACACTG GCCGGTTCGA GGCGCTGAAG
ACGGTCGGTG TTCGTGCGCG CGTCTCGGGT TTCATAGATT CCATTCATTT CAAGGACGGT
CAGATTGTCA AAGAAGGCGA TCTCCTGTTC GTGATCGACC AGCGGCCCTA TAAACTCGCG
GTCGATCAGG CTAAGTCCGA TCTCGAGCGG GCGCGAGCCA AGCTTGAGAT CGCCACGGCC
GACGTGGAGC GGGCGACGCC GCTGATCAGA CATCAGACCT TAACCGCACG TGAGTTCGAC
ACGCGAAGGT CCACGCAACG CGACGCCGTA GGCGGAGTTG GCGCGGCTGA GGCTGCGCTC
AAGCAAGCCG AACTCAACCT CGAATGGAGC GAGGTTCGTG CCCCCATAGC CGGACGTATT
TCCGATCGGC GCGTCGATGC CGGAAATCTG ATCACGGGCG GCCAGAGCGG GGCGACGTTG
CTGACCGTGA TTGTTTCCCT CGATCCCATT CACTTCATAT TCGATGGCAG CGAGTCCGAT
TTCCTGCACT ACCTGCGTCT CGCCGCAACC GGAGGGCGAC GATCGTCGCG CGACGTGCAG
AACCCGGTTG CCGTTCGACT CGCGGACGAG ACCGATTTCA AGCACACCGG CCGAATGGAT
TTCGTTGATA ACGTCATTAA CCCGAAGACA GGCACGATTC GCGGCCGCGC CATCTTCGAT
AACAAGGATG GATTGCTGAC GCCGGGCTTT TTTGGGCGGC TTCGACTCTA TGGCGGCGAG
ACCCAGGCAT TTCTGATCCC TGATAGTGCG ATCCTGTCCG ATCAGGCGAG CAAGATCGTA
TTCACCGTCG CTGAAGATGG CACGGTTGGC ATCAAAAAGG TCGAACTGGG TCCGATCGTT
GATGGACTGC GCGTCGTTCG CTCGGGTCTG GCGCCAAAAG ACCGTATCGT GATCGAAGGG
TTAGCACGCG CGCGGCCCGG ACAGAAGGTC AAGGCAGAGG ACGGAACGAT AAAGGCCGCT
GCGAACTAA
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| Protein sequence | MTRAPFPMIG LLLASLLAGC DAKPAASTNP PPLPSVTVSK PIQKSVTEWD EYTGRFEALK
TVGVRARVSG FIDSIHFKDG QIVKEGDLLF VIDQRPYKLA VDQAKSDLER ARAKLEIATA
DVERATPLIR HQTLTAREFD TRRSTQRDAV GGVGAAEAAL KQAELNLEWS EVRAPIAGRI
SDRRVDAGNL ITGGQSGATL LTVIVSLDPI HFIFDGSESD FLHYLRLAAT GGRRSSRDVQ
NPVAVRLADE TDFKHTGRMD FVDNVINPKT GTIRGRAIFD NKDGLLTPGF FGRLRLYGGE
TQAFLIPDSA ILSDQASKIV FTVAEDGTVG IKKVELGPIV DGLRVVRSGL APKDRIVIEG
LARARPGQKV KAEDGTIKAA AN
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