Gene Nham_0695 details

Gene Information

• Locus tag: Nham_0695
• Symbol: mnmA
• ID: 4031321
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 768832
• End bp: 770034
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637969230
• Product: tRNA-specific 2-thiouridylase MnmA
• Protein accession: YP_576042
• Protein GI: 92116313
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
• TIGRFAM ID: [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAACA GTCTGGAACT GGAAGGCCGT CCTCAGGACA CGCGGGTCGT GGTCGCCATG 
TCGGGCGGCG TCGATTCGTC GGTGACGGCC GCGCTGTTGA AGTCCGAGGG TTACGACGTC 
GTCGGAATAA CCCTGCAGCT TTACGATCAC GGCGCTGCGA CCCATCGCAA GGGCGCGTGC 
TGCGCCGGGC AGGATATCCA TGATGCCCGC AATGTCGCCG AGCGCCTCGG CATCCCGCAC 
TACGTGCTGG ACTATGAAAA CCGCTTTCGC GAAACCGTGA TCGAGAATTT CGCGGACAGC 
TATGCGTCGG GCGAAACGCC GGTGCCTTGC ATCGAGTGCA ATCGTCTGGT CAAGTTTCGT 
GATCTTTTGG CTACCGCGCG CGAGCTTGGC GCCGCGGCGC TGGCGACCGG TCATTACGTC 
GCCTCCCACC GCATGGCCGG CGGATCGCGC GCGCTGCTCT GCGCGGCGGA TGCGGATCGC 
GACCAGAGCT ATTTCCTGTT CGCCACCACG CGCGAGCAGC TCGATTTTCT GCGGTTTCCG 
CTCGGCGACA TGACCAAGCC GCAGACCCGC GAACTGGCGC GGAGCTTCGG ATTGTCGGTT 
GCCGACAAGC ATGACAGCCA GGATATCTGT TTCGTGCCGA CCGGTCGCTA CACCGATATC 
ATCAGTCAGC TGAAACCGAA CGCGATGGTA TCAGGCGATA TCGTCGATCT CGACGGGCAT 
GTCATCGGTC ATCACGACGG CATCGTGCAT TTCACAGTCG GGCAGCGCCG TGGCCTCGGC 
ATCGCCTCCG GCGCGCCGCT TTACGTCTTG AGTCTCGATG CCGCGAACCG GCGCGTGGTG 
GTCGGGCCGC GCGAAGCGCT GAAGATGCAT CGCATCATCC TGCGCGACGT GAACTGGATC 
GGTGACGGCG CGCTCGATCG CGCTGTCGGT GCCGGACTTG AGCTGTTCGT CCGGGTCCGC 
TCGACGCGCA AGCCCCAGCC GGCGTGGCTG CGTGCAATCG ATGGCCGCTA TGAGATCGAA 
CTCGTGGCCG GCGAGGAGGG CGTGTCGCCC GGTCAGGCCT GTGTGTTCTA CGATGGGCTG 
GAAGGGCAGG CGCGGGTGCT CGGCGGCGGA TTCATCGCGC GCGCCATGGC CAGGCGCGCA 
AACGAAATCG CTGCGCAGAA CGGCACGCCG GCGCAGCCCC TCGCCGCCGA ATTGCGCGGG 
TAG 

 

Protein sequence

MLNSLELEGR PQDTRVVVAM SGGVDSSVTA ALLKSEGYDV VGITLQLYDH GAATHRKGAC 
CAGQDIHDAR NVAERLGIPH YVLDYENRFR ETVIENFADS YASGETPVPC IECNRLVKFR 
DLLATARELG AAALATGHYV ASHRMAGGSR ALLCAADADR DQSYFLFATT REQLDFLRFP 
LGDMTKPQTR ELARSFGLSV ADKHDSQDIC FVPTGRYTDI ISQLKPNAMV SGDIVDLDGH 
VIGHHDGIVH FTVGQRRGLG IASGAPLYVL SLDAANRRVV VGPREALKMH RIILRDVNWI 
GDGALDRAVG AGLELFVRVR STRKPQPAWL RAIDGRYEIE LVAGEEGVSP GQACVFYDGL 
EGQARVLGGG FIARAMARRA NEIAAQNGTP AQPLAAELRG