| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0687 |
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| Symbol | |
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| ID | 4031184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 760419 |
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| End bp | 761798 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969222 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_576034 |
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| Protein GI | 92116305 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.120276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTTC TCATCGTTGG CACACTGAAG GGCCAGCTCA CGACCGCCAC CAAGATCGCC
ATGGACAATG GCGCCTCCGT CACCCACGCA ACCGGCAACG AACAAGCCAT GGCCGTGCTG
CGCGGCGGCA AGGGCGCCGA TCTCCTTCTG GTGGATGTCG GTCTCGATAT CCGCGACCTC
GTGATGCGGC TCGAGGCGGA ACACATTCAC GTCCCGATCG TCGCCTGCGG CATCACCAGC
GACGCGCGCG CCGCTGTCGC TGCGATCCAT GCCGGCGCCA AGGAATACAT CCCGCTGCCG
CCAGATCCGG AGCTGATCGC CGCGGTGCTC GCCGCCGTGG CGAACGATTC CCGCGATCTC
ATCTACCGCG ACGAAGCCAT GGGCAAAGTC ATCAAGCTGG CGCAGCAGAT CGCGTGCTCC
GACGCCTCGA TCATGATCAC CGGCGAATCC GGCACCGGCA AGGAGGTGCT GGCGCGCTAC
GTGCACACCC GCTCCAACCG CGCCAGGCGG CCGTTCATCT CGATCAATTG CGCCGCGATC
CCGGAGCATC TGCTGGAATC CGAACTGTTC GGTCATGAGA AGGGCGCGTT CACCGGGGCG
GTCGCGCGCC GCATCGGTAA ATTCGAGGAA GCCACCGGCG GCACGCTGTT GCTCGACGAA
ATTTCCGAAA TGGACGTGCG GCTGCAATCG AAGCTGCTGC GCGCCATCCA GGAACGCGTG
ATCGACCGGG TCGGCGGCAA CCGGCCGGTG CCGGTCGATA TCCGCATCAT CGCCACCTCG
AACCGCAACC TTGCGGACGC CGTGCGCGAG GGCACCTTCC GCGAGGACCT GCTGTTCCGC
CTCAACGTCG TCAACCTGAA GATTCCGCCG CTGCGCGAGC GTCCGGCCGA CATCCTCGAA
TTGGCGCAGC ATTTCGCGAA GAAGTATGCC GAGGCCAACG GCGTGCCGGT GCGTCCGGTT
TCGGCGGACG CGCGGCGCGT GCTGACGACC AACCGCTGGC AAGGCAACGT CCGCGAGCTT
GAGAACACCA TTCATCGCGC GGTGCTGATG GCGAGCGGCG ACGAGATCGG CGCCGACGCG
ATTCTGACGC CGGACGGCGA CCGCCTTGAT CTCGCGAAGA CGGCACCCGT CGTCGCCCAC
GCCACGCTCG CCGCCGAGCA AGTGACGCGC GCGCTGGTCG GCCGCACCGT GGCCGACGTC
GAGCGCGACC TGATCCTCGA AACGCTGAAA CATTGTCTCG GCAACCGCAC CCATGCCGCC
AACATTCTCG GCATCTCGAT CCGGACGCTG CGCAACAAGC TCAACGAATA TGCCGATGGC
GGCATCCCGA TCACGCCCGC CGGCAACGGC GATCATCGCG CGGTCGTGGC AACGGCCTGA
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| Protein sequence | MRLLIVGTLK GQLTTATKIA MDNGASVTHA TGNEQAMAVL RGGKGADLLL VDVGLDIRDL
VMRLEAEHIH VPIVACGITS DARAAVAAIH AGAKEYIPLP PDPELIAAVL AAVANDSRDL
IYRDEAMGKV IKLAQQIACS DASIMITGES GTGKEVLARY VHTRSNRARR PFISINCAAI
PEHLLESELF GHEKGAFTGA VARRIGKFEE ATGGTLLLDE ISEMDVRLQS KLLRAIQERV
IDRVGGNRPV PVDIRIIATS NRNLADAVRE GTFREDLLFR LNVVNLKIPP LRERPADILE
LAQHFAKKYA EANGVPVRPV SADARRVLTT NRWQGNVREL ENTIHRAVLM ASGDEIGADA
ILTPDGDRLD LAKTAPVVAH ATLAAEQVTR ALVGRTVADV ERDLILETLK HCLGNRTHAA
NILGISIRTL RNKLNEYADG GIPITPAGNG DHRAVVATA
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