| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0686 |
|---|
| Symbol | |
|---|
| ID | 4031183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 759197 |
|---|
| End bp | 760306 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637969221 |
|---|
| Product | exodeoxyribonuclease V |
|---|
| Protein accession | YP_576033 |
|---|
| Protein GI | 92116304 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.150776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCT TCACGCCGCA TCAGGATACA GCGCTGAAAG CCGTCGCCGA CTGGCTGAAA
GCCAAACCCG GCAAAAACAG CACGCCGCCG GTGTTCCGCC TGTTCGGCTA TGCCGGCACC
GGCAAGACCA CGCTGGCGCG CCATATCGCC GATGGCGTCG ACGGCGAGGT CAAATTCGCG
GCCTTCACCG GTAAGGCCGC GCTGGTGATG CGCAACAAGG GCTGCGACGG TGCGTCGACC
ATTCACTCGC TGATCTATCG CGCCCGTGAA TCCGGCGAGG AGCAACCGAG TTTCGAACTG
TGGGACGATG CGCCCGCTTC CAAGGCCAAG CTCATCGTCA TCGATGAATG CTCCATGGTG
GACGCGGAAC TCGGTCGCGA TCTGATGTCG TTCGACTGTC CGCTGCTGGT GCTGGGCGAT
CCCGCACAAC TGCCGCCGAT TCAAGGTGCC GGCTTCTTCA CCAATGCGGA GCCGGATGCG
ATGCTGACCG AGGTTCATCG TCAAGCCCAG GACGATCCGA TCGTGCGGAT GTCGATGGAC
GTGCGTGAGG GCCGCGATCT CGACATCGGA CGCTATGGCG AAAGCGAAGT GGTCGCGCGC
AGCGAACTCG ATCCGACGCG CGTGATGGAT GCCGATCAGG TGCTGGTCGG GCGCAACAAC
ACACGCCGTT CCTACAACAT GCGATTCCGG CAACGGCAAA ACATCGAGGA TCCGCTGCCG
GTGGCCGGCG ACAAGCTGGT CTGCCTGCGC AACAACCGCA AGAAGGCGCT GTTCAACGGC
GGCCTGTGGC GCGTGAAGTC CCGTGCAGCC TCGAAATCGA AGATCATCAC GATGCGACTG
TCGCCCGACG AGGAATTCGC GCACAAGGTG ACGAAAGTCT CGGTGCGGCA AGACTGCTTC
GCCGGCGGCA TCGAGGACAT TCCGTGGGAG CAGCGCAAAC CCTACGACGA GTTCGACTAC
GGCTATGTCC TGACGGTGCA CAAGTCGCAG GGCTCGCAAT GGGACGACGT CGTGCTGTTC
GATGAAAGCT TCGCTTTTCA GGACAGCCGC GCGCGCTGGC TCTATACCGG CATCACCCGC
GCCGCGAAGC GGCTGAGCAT CGTGGTGTAG
|
|---|
| Protein sequence | MTSFTPHQDT ALKAVADWLK AKPGKNSTPP VFRLFGYAGT GKTTLARHIA DGVDGEVKFA
AFTGKAALVM RNKGCDGAST IHSLIYRARE SGEEQPSFEL WDDAPASKAK LIVIDECSMV
DAELGRDLMS FDCPLLVLGD PAQLPPIQGA GFFTNAEPDA MLTEVHRQAQ DDPIVRMSMD
VREGRDLDIG RYGESEVVAR SELDPTRVMD ADQVLVGRNN TRRSYNMRFR QRQNIEDPLP
VAGDKLVCLR NNRKKALFNG GLWRVKSRAA SKSKIITMRL SPDEEFAHKV TKVSVRQDCF
AGGIEDIPWE QRKPYDEFDY GYVLTVHKSQ GSQWDDVVLF DESFAFQDSR ARWLYTGITR
AAKRLSIVV
|
|---|
| |