| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0673 |
|---|
| Symbol | |
|---|
| ID | 4031170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 742041 |
|---|
| End bp | 742982 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637969209 |
|---|
| Product | cyclohexadienyl dehydrogenase |
|---|
| Protein accession | YP_576021 |
|---|
| Protein GI | 92116292 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG CGCCCTTATT CCAGCGGGTC GCGCTGATCG GCTTCGGCCT CATCGGCGGT
TCGATCGCGC GCGCGGCGCG CGCGCAAGGC CTCGCCGGCG AAATCGTCGC CACCGCACAC
TCCGCGAAGA CGCGTGCGCG GGTGGCGGAG CTCGGCATCG CCGATCGCGT GGTGGAAACC
AACGCCGAAG CCGCTGATGG CGCCGACCTC GTGATCCTCT CCATTCCGGT CGGGGTGTGC
GGAGCAGTGG CGCAGGAGAT CGCATCTCAC CTCAAGCCGG GCGCCATCAT CTCCGACGTC
GGATCGGTGA AAGGCGCCGT CGTCCGCGAC ATGGCTCCGC ACCTGCCCGC CGGGGTGCAT
TTCGTGCCCG CGCATCCGGT GGCCGGGACC GAGCACTCGG GTCCGGATTC CGGCTTTGCC
GAGCTGTTCA TCAACCGCTG GTGCATCCTG ACGCCGCCTG AGGGGACGGA TCCCGCCGCG
GTGGACAGAT TGCGCGCGTT CTGGACAGCG ATCGGCGCCA GGGTCGAGAC CATGACGCCG
GAGCATCACG ATCTGGTGCT GGCGATCACC AGCCATCTGC CGCACCTGAT CGCCTATACC
ATCGTCGGCA CCGCGGAAGA ACTCGGAGAC GTCACATCCT CCGAAGTGAT GAAATTCTCC
GCCGGCGGCT TCCGCGACTT CACCCGGATC GCGGCGTCCG ATCCCACCAT GTGGCGCGAC
GTATTCTTGA CCAACAAGGA CGCGGTGCTG GAGATGCTCG GCACCTTCAA CGAGGACCTC
TCCAAGCTGA CGCGCGCCAT GCGCCGCGGC GATGGCGAAG CGCTGTTCGA GCATTTTACC
CGAACCCGCG CGATCCGGCG CGGCATCGTC GAGATCGGTC AGAACTCTGC TGCCCCCGAC
TTCGGGCGGC TGCAAACGAG CGCGACGAAG AAGAATTCCT GA
|
|---|
| Protein sequence | MTAAPLFQRV ALIGFGLIGG SIARAARAQG LAGEIVATAH SAKTRARVAE LGIADRVVET
NAEAADGADL VILSIPVGVC GAVAQEIASH LKPGAIISDV GSVKGAVVRD MAPHLPAGVH
FVPAHPVAGT EHSGPDSGFA ELFINRWCIL TPPEGTDPAA VDRLRAFWTA IGARVETMTP
EHHDLVLAIT SHLPHLIAYT IVGTAEELGD VTSSEVMKFS AGGFRDFTRI AASDPTMWRD
VFLTNKDAVL EMLGTFNEDL SKLTRAMRRG DGEALFEHFT RTRAIRRGIV EIGQNSAAPD
FGRLQTSATK KNS
|
|---|
| |