| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0656 |
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| Symbol | |
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| ID | 4031235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 716744 |
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| End bp | 717505 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969187 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_576004 |
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| Protein GI | 92116275 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.580386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTGG AAGGTCAGGC AGCCATCGTC ACCGGCGGAG CGTCGGGACT GGGCGCGGCG
GCCGCGCGAA AACTCGCCGC GCAGGGCGTC AGGGTCGCGG TCTGCGACAT CAACACAAAA
CTCGCGGAGG AACTGGCAAA GGAGATCGGC GGCACCGCCG TGACCTGCGA CGTATCCGAT
GCGGCGTCGG GCGAAGCCGC CATGGTCGCG GCGGCGAAGG TCCACGGTCC GGCGCGAGTG
CTGGTGAACT GCGCCGGCAT CGGCCTCGCC AGGCGCGTGG TCGGCCGCGA GGGGCCGCAT
GCGCTGGCCG ACTTCAACCA CGTCATCAGC GTCAACCTGA TCGGCACGTT CAACATGCTG
CGGCTCGCGG CCGCTGAAAT GTCGACACTC GAACCGCTGG AGGGCGGCGA GCGCGGTGTG
GTGATCAACA CCGCCTCGAT CGCGGCCTAT GATGGACAGG TCGGCCAGGC GGCCTATTCG
GCGTCGAAGG GCGGCATCGT CGGCATGACG CTGCCGATCG CGCGTGAACT CGCGCAATTC
GGCATCCGCG TTCTCACCAT CGCGCCGGGC CTGTTCCTGA CGCCGCTGCT CGGCGCATTG
CCGCAAGCCG CGCGGGACAG TCTCGCCAGC ACGATCCCGT TTCCGCACCG GCTCGGCTCG
CCCGACGAAT ACGCGTCGCT GGCGATGCAC ATGATCGACA ATCCCTATCT CAACGGCGAG
GTCGTGCGGC TGGATGCCTC GCTGCGCATG GCGCCGAAGT AG
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| Protein sequence | MQLEGQAAIV TGGASGLGAA AARKLAAQGV RVAVCDINTK LAEELAKEIG GTAVTCDVSD
AASGEAAMVA AAKVHGPARV LVNCAGIGLA RRVVGREGPH ALADFNHVIS VNLIGTFNML
RLAAAEMSTL EPLEGGERGV VINTASIAAY DGQVGQAAYS ASKGGIVGMT LPIARELAQF
GIRVLTIAPG LFLTPLLGAL PQAARDSLAS TIPFPHRLGS PDEYASLAMH MIDNPYLNGE
VVRLDASLRM APK
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