Gene Nham_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0643 
Symbol 
ID4031222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp704898 
End bp705824 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID637969174 
Productornithine carbamoyltransferase 
Protein accessionYP_575991 
Protein GI92116262 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.652034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTG CGCCACGGCA TTTTCTCGAC CTGTTCGACG TGCCGACCAC GGAACTGCGC 
GCGATCCTCG ATGCCAGCGT GGCGATGAAG AAGCGGCGCA AGGAGGGCCG GATCGCCGAC
AAGCCGCTCG ACGGCAAGAC GCTGGCGATG ATCTTCGACA AGCCTTCGAC GCGCACCCGC
GTGTCGTTCG ACGTCGGCAT GCGCCAGCTC GGCGGCGAGG CGATCATGCT GACCGGGGCC
GAAATGCAGC TCGGACGCGG CGAGACCATC GCGGATACCG CGAGGGTGCT GTCGCGCTTC
GTCGATATCA TCATGATCCG CATCCTCAGC CACGACGCGC TGACGGAGCT GGCGGCGCAT
GCAACCGTGC CCGTCATCAA CGGACTGACG CGGCGCTCGC ACCCCTGCCA GGTGATGGCC
GATGTGATGA CTTTCGAGGA GCATCGCGGG CCGATCAAGG GCCGCACCGT GGCGTGGACC
GGCGACGACA ACAACGTGCT GGCGTCGTGG GCGCATGCGG CGGACCGCTT CAGCTTCAAT
CTCAACGTCG CGACACCGCC GGAACTTGCG CCGAACAAGC TCCTGAAGGA CTGGATCAGG
TCGAGCGGGG CGTCGATCAA GCTCGGCACC AATCCGGAAG CGGCGGCGCG CGGCGCCGAC
TGCATCGTCA CCGACACCTG GGTGTCGATG GGCGATAAGG ACGGCGAGCA CCGTCACAAC
CTGCTCAAGC CCTATCAGGT CAACGCCAAG CTGATGTCGC TGGCGAAGCC GGATGCGTTG
TTCATGCACT GCCTGCCGGC GCATCGCGGC GACGAGGTCA CCGATGAGGT GATCGACGGG
CCGCAGTCGG TGGTGTTCGA CGAGGCCGAA AACCGCATGC ACGCCCAGAA GGGTATTCTG
GCCTGGTGCC TCGGCGCGGC GGGATAA
 
Protein sequence
MSTAPRHFLD LFDVPTTELR AILDASVAMK KRRKEGRIAD KPLDGKTLAM IFDKPSTRTR 
VSFDVGMRQL GGEAIMLTGA EMQLGRGETI ADTARVLSRF VDIIMIRILS HDALTELAAH
ATVPVINGLT RRSHPCQVMA DVMTFEEHRG PIKGRTVAWT GDDNNVLASW AHAADRFSFN
LNVATPPELA PNKLLKDWIR SSGASIKLGT NPEAAARGAD CIVTDTWVSM GDKDGEHRHN
LLKPYQVNAK LMSLAKPDAL FMHCLPAHRG DEVTDEVIDG PQSVVFDEAE NRMHAQKGIL
AWCLGAAG