Gene Nham_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0634 
Symbol 
ID4031291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp695595 
End bp696947 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID637969165 
Producthistidine kinase 
Protein accessionYP_575982 
Protein GI92116253 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTC CGGCGCCTGA CAGAATTCGA CCGACCGCGG AAGGAGCCGC CCCGCGGACT 
CGTGTGTCCG CTTCGAGGTT TGCATCCTGG ACGGACCGGT TGCGCCGCGC GGCGCTTATT
CTGCTGGTTG CCGGGCTCGT GCTGGCTGCG CTCGTCGTGT TCGGCGGCTT GCAGCCGCCC
CGCGCCATCG TCGCCTTTGT CTGCATCGTC GGCGCGGCGC TGGTGCCCTG GCAGGTTCAC
GATCCGGCCG CGTCGCGCGA AGCCGACCTC GGCGCCAATC CGGTGGATAC TGCGGCGGTT
CATGCCATCG TTGCCGGTAT GCCGGACCCC AACGTGCTGC TCGATCGAGC CGGCCGCGTC
ATCCATCTCA ATGCCGCTGC GGCGCAACTC GTGCCGGCGC TGCGCCAGAA CGAACTCGCG
CAATTCGCGC TGCGATCGCC CGAGATCGTC ACGGCGTTGC GCGAGGCGGT CGCGACGAGG
GAAACGCGAC GGACGACCTA TCTCAATCAT GCCCCGGTCG ATCGCTGGAT GGAATTGATC
GTCACGCCGG TTCCGGTGCC AACCGCGTTC GGCGGCGTCG ACCATTGCAT GCTGTTGACG
TTTCACGATC AGACGCCCCT GCGCCGGGTC GAGGAAATGC GCGCCGACTT CGTCGCCAAT
GCGAGCCACG AGTTGCGCAC GCCGTTGGCG GCGCTGTCAG GCTTTATCGA TACGCTGCAA
GGGCCGGCGC GCGACGACGC CGGCGCGCGC GACCGCTTTC TCGGCATCAT GCATGCGCAG
GCCACGCGCA TGGCGCGGCT GATCGACGAT CTGCTGTCGC TGTCGCGGGT CGAACTGTCG
GCGCATGTGC GGCCGGATGC GCTGGTCGAC CTCATCCCGA TCGTGCGTCA GGTCGTCGAC
GGGCTCGAGC CGCTGGCGGC GGAGCGCCAG GTCAGGATCG AAGTCGAACT GCCGCAAACG
CCGGTGATGA TCTGCGGCGA TCGCGAGGAG CTGCTGCGGC TGTTCGAGAA CCTGATCGAG
AACGCGCTGA AATACGGCGC GTCCGGCAGC AGGGTCGTGG TGTCGTCGAT GATGGACGTC
TCGCTGGACG GCGCGCCGGA ATTCCGCGTG GCAGTACGGG ATTTCGGTCG CGGAATCGCG
CCGGAGCATT TGCCGCGCCT CACCGAACGC TTCTATCGCA TCGACGCCGG CGACAGCCGG
GCTCAGGGCG GCACCGGCCT CGGCCTGTCG CTGGTGAAAC ATATCCTGAA CCGCCATCGC
GGCCGCCTGC TGATCGAAAG CGTGCCCGGC CATGGCGCGA CCTTTACGGC GGGCTTCCCT
CCGGCACAGG CTGTGTCTCG GCCTGAAGTT TAA
 
Protein sequence
MATPAPDRIR PTAEGAAPRT RVSASRFASW TDRLRRAALI LLVAGLVLAA LVVFGGLQPP 
RAIVAFVCIV GAALVPWQVH DPAASREADL GANPVDTAAV HAIVAGMPDP NVLLDRAGRV
IHLNAAAAQL VPALRQNELA QFALRSPEIV TALREAVATR ETRRTTYLNH APVDRWMELI
VTPVPVPTAF GGVDHCMLLT FHDQTPLRRV EEMRADFVAN ASHELRTPLA ALSGFIDTLQ
GPARDDAGAR DRFLGIMHAQ ATRMARLIDD LLSLSRVELS AHVRPDALVD LIPIVRQVVD
GLEPLAAERQ VRIEVELPQT PVMICGDREE LLRLFENLIE NALKYGASGS RVVVSSMMDV
SLDGAPEFRV AVRDFGRGIA PEHLPRLTER FYRIDAGDSR AQGGTGLGLS LVKHILNRHR
GRLLIESVPG HGATFTAGFP PAQAVSRPEV