Gene Nham_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0624 
SymbolmtgA 
ID4031281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp686485 
End bp687165 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID637969155 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_575972 
Protein GI92116243 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.271201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGGG CGATCGGTGT CACGGTGCTG GCCGTCGTCG GCCTGCTGCT TTTGCCCTAT 
TTGCTGACGC CGCTATACCG GACCGGCCAT CCGGTCTCGA CGCTGATGAT ATGGCGCAAG
CTCTCCGGCG CGTCGATGTC GCGGCAGTGG ATCGATTTCG CGGCGATGTC GCCGGCGCTG
CCGCGCTCCG TGGTTGCGTC GGAGGATGCC AAGTTCTGCA GCCATCACGG CATCGACTGG
GACTCGCTGC GGGATGTGCT CGACGATGCC GAGGACGGCG AGGTGAAGCG CGGCGGCTCG
ACCATCACGC AGCAGGTGGC GAAAAATCTG TTCCTCTGGC CGGGGCGCAG CGTGATCCGC
AAGGCGCTGG AATTTCCGCT GGCGATGTGG ATCGACGCCG TCCTGCCCAA GCAGCGGATT
CTTGAAATCT ATCTGAATAT CGCGGAATGG GGTCCGGACG GCCAGTTCGG AGTTGAGGCC
GGTTCCCGCT ATGCCTTCGG GCGCTCCGCG ACCGGCCTGA CGGCGCGGGA AGCCGCGCTC
ATGGCCGCGA TCCTGCCCAA CCCGGTCAGG CGCAGCGCCC GAAAGCCCGG TCCCGGGGTT
CGCCGGCTGG CGGGGACCTA TATGGTCCGG GCGCGGGCCG CCGAACTACG CAGTTGCTGG
CGCGACGATC GTGGCTCTTA A
 
Protein sequence
MRRAIGVTVL AVVGLLLLPY LLTPLYRTGH PVSTLMIWRK LSGASMSRQW IDFAAMSPAL 
PRSVVASEDA KFCSHHGIDW DSLRDVLDDA EDGEVKRGGS TITQQVAKNL FLWPGRSVIR
KALEFPLAMW IDAVLPKQRI LEIYLNIAEW GPDGQFGVEA GSRYAFGRSA TGLTAREAAL
MAAILPNPVR RSARKPGPGV RRLAGTYMVR ARAAELRSCW RDDRGS