Gene Nham_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0622 
Symbol 
ID4031279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp684615 
End bp685301 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID637969153 
Producthypothetical protein 
Protein accessionYP_575970 
Protein GI92116241 
COG category[S] Function unknown 
COG ID[COG4291] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCA AGGACGCCGA GGATCCATCC CTGCTTCGTT TCAGGAAGTT GCCCCGACCG 
GTGCGCATAA TCTATGCCCG GCCGCGCACC TTCATCGCCT TCGCCGTCGG CGTCGTCGCG 
TGCCTGCTGC TGCCGCATTC GCTGCGGCTG GTGACGCGAC TGCTGATCGG CTGGGACGTT 
TTCGCCGCAC TCTATCTCAT CCTGGTCTTC ACCGTGGTGT TCGGCAGCGG CCTCACCCAC 
ATCCGCCGCA ACGCCCGGCT TCAGGACGAC GGCCGCTTCG TGATCCTGCT GGTGACCGCG 
ATCGGCGCGT TCGCCAGCAT CGCCGCGATC GTGTTCGAGC TTGGCGATCA TAACCATAGC 
GCACCGGAAC TGGCGCTGGC GACGCTGACC ATCGCGCTGT CCTGGGCCGC CGTGCACACC 
ACCTTCGCGT TGCATTACGC GCACGAATAT TATCGCGGGG CCACACCCGG CGGCCTGCAA 
TTTCCGAGCG GCGATCGGCA CGAGGACGCC GACTACTGGG ATTTCGTCTA TTTCTCGTTC 
GTGATCGGGA TGACCGCGCA GGTATCCGAT GTCGGCATCA CCGACAGGAT CATCCGCCGC 
ACCGTGACGG CGCATGGCGT GATCTCGTTC GTCTACAACA CCGCGCTGCT GGCGTTGATG 
GTCAATATCG CGGCGAGCGC GATCTGA
 
Protein sequence
MAGKDAEDPS LLRFRKLPRP VRIIYARPRT FIAFAVGVVA CLLLPHSLRL VTRLLIGWDV 
FAALYLILVF TVVFGSGLTH IRRNARLQDD GRFVILLVTA IGAFASIAAI VFELGDHNHS 
APELALATLT IALSWAAVHT TFALHYAHEY YRGATPGGLQ FPSGDRHEDA DYWDFVYFSF 
VIGMTAQVSD VGITDRIIRR TVTAHGVISF VYNTALLALM VNIAASAI