| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0550 |
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| Symbol | |
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| ID | 4031298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 607908 |
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| End bp | 610484 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969080 |
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| Product | hypothetical protein |
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| Protein accession | YP_575900 |
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| Protein GI | 92116171 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTT GCGCATTCGC AATGACAGCG AAGATGACCC GCACGCCGCT CCTTCCCCTG
CGTCTGGCAT TGCGCGAACT GCGCAGCGGG CTGCGCGGCT TCTATGTCTT CATCGCCTGC
ATCGCGCTCG GCGTCATGGC GATTGCCGGC GTCGGCTCCG TGGCCTCGAG TCTGTCGGAT
GGCCTGGCGC GCGAGGGCCG CACGCTGCTC GGCGGCGATG TCGCATTTTC GTTGATCCAG
CGCGAGGCGA AACCGGACGA GATCGCATTC CTGCGCGCGC GAGGAACGGT CTCGGTGGCG
GCGACGCTGC GCGCGATGGC GCGCGTGCCG GACGGCAGGC TGGCGCTGGT CGAGCTCAAG
GCGGTCGATC GGGCCTATCC CATGCTCGGC GCGCTGACGC TGGCGCCGAC CATCCCGATG
GCCGATCTGC TCGCCGAGCA TGATGGGGTA TTCGGCGCGG CCGCCGATCC GGCCCTGCTG
GCGCGGCTGG ATCTCAAGGT CGGCGATCGT GTCACGGTGG GCAGCGCCAC CTTCGAGATC
CGCAGCGCGG TCGACGCCGA GCCCGACAAG CTGGCCGGCC GTCTTGGATT CGGTCCGCGC
TTTCTGGTCA GCATCGATGG CTTGCGCGCC ACCGCCTTGC TGCAGCCCGG CAGTCTGGTG
CGCTGGACTT ACAGGGTGCG GCTTGCCGGC GACGGTGCCG ACGACAAGGC GGCGACGGCG
TTGGCCGACG ATGCGCGGGC GGCGCTGCCG GAGGCGGGCT GGGACATCCG CAGTCGCAAC
AATGCCTCGC CGCAACTCGA GCGGACCATC TCGCGGTTCA CGCAGTACCT CACCCTGGTC
GGGCTCGCCG CCTTGCTGGT TGGGGGCGTC GGCGTCGGCA ATGCCGTCAA GAGCCACATC
GACCGCCGCC GCGATGTTAT CGCGTCGTTC AAGGCGCTGG GCGCGACCGG GCGCGATGTG
TTTGCGATCT ATCTGACGCA GGTCATGGTG CTGGCCGCTC TCGGATCGCT CGCCGGTCTG
GTTGCCGGCG CGGCGCTGCC CTTCATCATC GTCGGCGCCT TCGGACACCT TCTGCCGTTG
CCGGTGGTCC CGGCGCTGCA CCCCGAGGCA TTGGCGGTAT CGGCCGTATA TGGCCTGTTG
ACCGCGCTGG CGTTCGGCAT CTGGCCGCTG GCGCGGGTCC ATGACATTCC GGTCGCGGCG
CTGTTTCGCG ATACCGTCGC ACACGAAGTC CACCGGCCGC AGACCCGCTA CCTGGTCTGG
ATGGCGCTCC TGATCGCGCT TCTGGTCGGG GTCGCCATCG GCCTTGCCTA CGACAAGCGC
GTGGCTTTGG TGTTCGTGGC GGCGTCGGCG ATGGTTTTTG CGTTGTTGCG CGGCATCGCC
TCCGCCCTGA TGGCGCTGGC GCGCCGGCTG CCGCGATCCC GGATCACCAT GGTGCGGCTT
GCGATCTCGA ACATCCATCG TCCGGGAACG CTGACGCCGT CGGTGGTGCT GTCGCTCGGC
CTCGGGCTTG CCGTGCTGGT CACGATCACC CAGATCGACG GCAATCTGCG GCGGCAATTC
CTGGCGGCGC TGCCGGAGCG CGCGCCGTCG TTTTATTTCA TCGACATTCC CTCGTCGATG
GCGGATCGGT TCACGGCATT CCTTAAGCAG CGGGCGCCGC AGGCAAAGGT GGAGGACGTG
CCGATGCTGC GCGGACGCAT CGTCGCAGCG CGCGGCGTCA GGGCCGAAGA CCTGAAACCC
TCCCACGATG CCGCATGGGT GCTGCAAAGC GATCGCGGCC TGACCTACAC CGGCGAGGTG
CCGAAGGGGT CGAAGGTGGT CGAGGGCGAG TGGTGGGGAT CGGACTATGA CGGGCCGCCG
CTGGTGTCGT TCGAGAAGAA GGTCGCCGAC GGGCTCGGGC TTAAGCTCGG CGATACCGTC
GTGGTGAATG TGCTCGGCCG CGACATCACG GCCACCATCA GCAACATGCG CAGCGTGGAC
TGGCAGAGCC TCGGCATCAA TTTCGTGCTG GTGTTCTCCC CCAACGCCTT TCGCGGCGCG
CCGCACACCC ATATCGCGAC CCTGACCGAG ATAGATGCCA GCCCCGCCCA CGACGTCGCC
ATCATCAAGG CGGTTGGCGA TGCTTTCCCG ATGGTGACAA GCGTGCGGGT CCGCGAGGCC
ATGGAAACCA TCGGGACCGT CGTCACCAAC CTGGTGCTGG CGATCCGCGG CGCCAGTTCC
GTCACCCTGA TTTCGGCGAT TCTCGTCCTC GGCGGCGCGC TGGCCGCCGG CCATCGCCAT
CGCGTCTACG ACGCGGTGAT CCTGAAAACC CTCGGCGCCA CCCGATTGCG GCTGCTCGGC
GCCTATACGC TGGAGTACTT GATGCTCGGC GCGGCCACCG CGGTGTTCGG TGTGGCCGCC
GGTTCCATCG CGGCGTGGCT GATCGTGACG CGGCTGATGA CGCTCGGCTT CGAATGGCAG
GCGGGTAGCG CGGCCATGGT GGTGGCCGCA GCGCTGCTGG TCACGGTCGT GCTGGGGTTG
GCCGGCACGC TGATGGCGCT CAACCAGAAG CCGGCCTCGG TGTTGCGGAA TTTATGA
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| Protein sequence | MRSCAFAMTA KMTRTPLLPL RLALRELRSG LRGFYVFIAC IALGVMAIAG VGSVASSLSD
GLAREGRTLL GGDVAFSLIQ REAKPDEIAF LRARGTVSVA ATLRAMARVP DGRLALVELK
AVDRAYPMLG ALTLAPTIPM ADLLAEHDGV FGAAADPALL ARLDLKVGDR VTVGSATFEI
RSAVDAEPDK LAGRLGFGPR FLVSIDGLRA TALLQPGSLV RWTYRVRLAG DGADDKAATA
LADDARAALP EAGWDIRSRN NASPQLERTI SRFTQYLTLV GLAALLVGGV GVGNAVKSHI
DRRRDVIASF KALGATGRDV FAIYLTQVMV LAALGSLAGL VAGAALPFII VGAFGHLLPL
PVVPALHPEA LAVSAVYGLL TALAFGIWPL ARVHDIPVAA LFRDTVAHEV HRPQTRYLVW
MALLIALLVG VAIGLAYDKR VALVFVAASA MVFALLRGIA SALMALARRL PRSRITMVRL
AISNIHRPGT LTPSVVLSLG LGLAVLVTIT QIDGNLRRQF LAALPERAPS FYFIDIPSSM
ADRFTAFLKQ RAPQAKVEDV PMLRGRIVAA RGVRAEDLKP SHDAAWVLQS DRGLTYTGEV
PKGSKVVEGE WWGSDYDGPP LVSFEKKVAD GLGLKLGDTV VVNVLGRDIT ATISNMRSVD
WQSLGINFVL VFSPNAFRGA PHTHIATLTE IDASPAHDVA IIKAVGDAFP MVTSVRVREA
METIGTVVTN LVLAIRGASS VTLISAILVL GGALAAGHRH RVYDAVILKT LGATRLRLLG
AYTLEYLMLG AATAVFGVAA GSIAAWLIVT RLMTLGFEWQ AGSAAMVVAA ALLVTVVLGL
AGTLMALNQK PASVLRNL
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