| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0545 |
|---|
| Symbol | |
|---|
| ID | 4030837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 603310 |
|---|
| End bp | 604278 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637969075 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_575895 |
|---|
| Protein GI | 92116166 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.557349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG ACAAGATTGC CTTGATCGGC TCCGGTCAGA TCGGAGGAAC GCTCGCTCAT
CTCATCGGAC TGAAAGAACT CGGCGATGTC GTGATGTTCG ATATCGCGGA AGGCATTCCG
CAGGGCAAAT CTCTCGATAT CGCACAGTCG TCCCCGGTGG ACGGGTTCGA CGCCAAACTG
ACCGGCGCCA ATTCCTATGA AGCACTCGAG GGCGCCAGGG TCTGCATCGT GACCGCCGGC
ATCCCGCGCA AACCAGGCAT GAGCCGCGAC GATCTCTTGA GCATCAATCT CAAGGTGATG
GAGCAGGTCG GCGCCGGCAT CAAGAAATAT GCGCCCGACG CCTTCGTCAT CTGCATCACC
AATCCGCTCG ACGCCATGGT GTGGGCGCTT CAGAAAGCCT CGGGTATGCC GGCGAAGAAG
GTGGTCGGCA TGGCGGGCGT GCTGGACTCC TCGCGCTTCC GCTATTTCCT CGCCGACGAA
TTCGACGTGT CGGTGGAAGA CGTCACGGCC TTCGTGCTCG GCGGCCATGG CGACAGCATG
GTGCCGCTGG TGAAGTACTC GACCGTGGCC GGCATTCCAC TGCCGGATCT CGTCAAGATG
GGCTGGACCT CGCAGGCGCG CATCGACGAG ATCGTCGATC GCACCCGCAA CGGCGGCGCC
GAGATCGTCA ACCTGCTGAA AACCGGTTCG GCGTTCTATG CGCCCGCCGC CTCCGCGATC
GCGATGGCGG AAAGTTACCT GCGCGACAAG AAGCGCGTGC TGCCATGCGC CGCCTATCTC
AACGGCGAGT TCGGCGTGAA GGACATGTAT GTCGGCGTGC CCGTGGTGAT CGGCGCCAGG
GGCGTCGAGC GCATTGTCGA GATCGAACTG GCGGGCAAGG ATCGCGAGGC CTTCGACAAA
TCGGTAGGCG CGGTTCAGGG GCTCATCGAT GCCTGCAAGA AGATCGCACC CGATCTGCTG
GGGAAGTGA
|
|---|
| Protein sequence | MARDKIALIG SGQIGGTLAH LIGLKELGDV VMFDIAEGIP QGKSLDIAQS SPVDGFDAKL
TGANSYEALE GARVCIVTAG IPRKPGMSRD DLLSINLKVM EQVGAGIKKY APDAFVICIT
NPLDAMVWAL QKASGMPAKK VVGMAGVLDS SRFRYFLADE FDVSVEDVTA FVLGGHGDSM
VPLVKYSTVA GIPLPDLVKM GWTSQARIDE IVDRTRNGGA EIVNLLKTGS AFYAPAASAI
AMAESYLRDK KRVLPCAAYL NGEFGVKDMY VGVPVVIGAR GVERIVEIEL AGKDREAFDK
SVGAVQGLID ACKKIAPDLL GK
|
|---|
| |