| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0536 |
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| Symbol | xerC |
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| ID | 4030828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 592949 |
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| End bp | 593851 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969066 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_575886 |
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| Protein GI | 92116157 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.538013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACGAT GGCTGTCGCA TCTGCGCGCC GAGCGCCGGC TGTCGCCCAA GACGTGCGAG
GCCTATGCGC GGGACGCCCG GCAGTGCCTG ATGTTTCTCA GCCAGCACTG GGGCGAGTTG
GTGACGCTGA AACGCTTCGC CGCGCTTGAG GCGAGCGATG TCAGGGCCTT CATGGCCGCG
CGCCGCGCCG ATGATATCGG TGGCCGGTCG TTGATGCGGG CGCTGGCGGG CCTGCGCTCG
TTCGCGCGAT TTCTGGAACG GGAAGGGCTC GGCAAGGTCG GCGCACTTAG CGCGATCCGC
GCGCCGAAGG TCGGCAAGAG CCTGCCGAAA CCGATCCAGA TGAGCGCGGC GAAGCGGTTC
GCCGATGCAT CCGAGCGGGC CGGCGAGGAT CGCGAGCCAT GGATCTGGGC GCGCGATGCG
GCGGTGATGG CGCTCTTGTA CGGGTCGGGC CTGCGCATTT CCGAAGCGCT CGGGCTGAAG
CGGCGCGACG TGCCGCAGCC CGGCGCGGGC GACGTTCTGG TCGTCACCGG TAAGGGCAAC
AAGACGCGGA TGGTGCCGGT GCTGCAGAAT GTGCTGGCGC TGGTCCATGA GTATGTGGCG
GTGTGTCCGC ATTCACTGCC GCCGGAGGGG CCGATCTTCG TCGGCGCGCG GGGTGGACCG
CTCAGCCCGC GTATCATCCA GCTTACCATG GCGCGGATGC GCGGCGCGCT CGGCCTGCCC
GACAGTGCGA CGCCGCACGC GTTGCGCCAT TCATTTGCGA CGCATCTCTT GAGCCGCGGC
GGCGACCTGC GCGCGATCCA GGAACTGCTC GGCCACGCCT CGCTCTCGAC CACCCAGATC
TACACCGGCA TCGACAGCGA GCGGCTGTTA GAAGTCTATA AGACTGCGCA TCCGCGCGCC
TGA
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| Protein sequence | MVRWLSHLRA ERRLSPKTCE AYARDARQCL MFLSQHWGEL VTLKRFAALE ASDVRAFMAA
RRADDIGGRS LMRALAGLRS FARFLEREGL GKVGALSAIR APKVGKSLPK PIQMSAAKRF
ADASERAGED REPWIWARDA AVMALLYGSG LRISEALGLK RRDVPQPGAG DVLVVTGKGN
KTRMVPVLQN VLALVHEYVA VCPHSLPPEG PIFVGARGGP LSPRIIQLTM ARMRGALGLP
DSATPHALRH SFATHLLSRG GDLRAIQELL GHASLSTTQI YTGIDSERLL EVYKTAHPRA
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