| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0535 |
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| Symbol | |
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| ID | 4030827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 590563 |
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| End bp | 592779 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637969065 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_575885 |
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| Protein GI | 92116156 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.381236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCATT TTTCGCGCAA CGGCACGTCT TCAACACCGT CATCGACGAC ACGCGTCGTA
GATGTGCTGG TTCCCGTTGC GATCGATCAG GCCTATTCCT ATCGCGTGCC GCGCGGCATG
GAGGTTGCGC CCGGCGACCT CGTGACAGTA CCGCTCGGAC CCCGCGAGGT GATCGCCGTG
GTCTGGGCCG AGAACCCGGC GCCCGATCCG CGCCTGCACA ACCGCTTGAA AGACATCGGC
GAAAAGCTCG ACCTGCCGCC GCTTAAGGAT GAACTGCGTA CGCTGGTCGA CTGGGTCGCC
AACTACACGC TGTCGGCGCG CGGCATGGTG ATGCGCATGA GCCTGCGAAT GGGCGAGCAA
CTCGGACCGG AGCGGGTGCG GCCGGGTGTG CGGCTGACCG GCGCGCCGCC GCAGCGCATG
ACCCCGGCGC GACAGCGGCT GATCGCGGTG TTGTCCGATG GTCTGCTGCA CGGAAAATCC
GATGCGGCGA AAGAAGCCGG CGTCAGTGCC GGCGTGGTCG ACGGCCTCGT CGACGAGAGG
ACGTTGACGG TCGAGCCGAT GCCGCGTCCA CCGCCGCCAC CGCCGCCCGA TCCGGATTTC
GCCGTGCCGG ATTTTTCCCG ATCACAGCGG ACCGCCGTGG ACGCCATGCG CGCGCTGGCG
TCGAACGGCA CGTTCCACGT CGCGTTGCTC GACGGCGTCA CCGGCTCGGG CAAGACCGAG
GTCTATTTTG AGGCGGTCGC AGAAACCATC CGCCGCGGCA AGCAGGCGCT GATCCTGATG
CCGGAGATCG TGCTGACCGG GCAGTTCCGC GACCGCTTCG CCGCCCGCTT CGGCGAGCGG
CCGCTGGAGT GGCATTCCGA ACTGACGCCG CGCACCCGCG CGCGCAACTG GGCCGCGATC
GCGGCAGGCG AGGGGCAGGT CGTGGTCGGC GCACGCTCGG CGCTGTTCCT TCCTTACGCC
GATCTCGGAC TGATCATTGT CGATGAGGAG CACGACCAGG CTTACAAACA GGACGAGGGC
ACACACTATC ACGCCCGCGA CATGGCCGTG GTGCGCGCGC ATATCGCGAA AATCCCGATC
GTGCTGGCGT CGGCGACCCC ATCGGTGGAG AGCGAGGTCA ATGCGCGCAA GGGACGCTAC
CAGCGCGTCG CGCTGACGTC CCGGTTCGGC GGTCAGCACA TGCCGCAGAT CGAGGTGATC
GATCTGCGCC GCGAGGGACC GCCGCGCGGC CGCTTCATTT CTCCGCGTCT CGCCGGGGAA
GTCCGCGCCG CTATCGAACG GCGGGAGCAG GCGCTGCTGT TTCTCAACCG TCGCGGCTAC
GCGCCGCTGA CCTTGTGCCG GGCCTGCGGG CATCGCTTCG CCTGCACCAT CTGCGATGCG
TGGCTGGTCG ATCACCGCTT CCGTCAGCGG CTGGTATGCC ACCACTGCGG CTTCTCGATG
CCGCGCCCGC ATCAATGTCC GCATTGCGCG GCGGAAGAAA CGCTGGTGGC GGTCGGCCCC
GGCGTCGAGC GCTTGCAGGA AGAAGCTGCC GCGCTTTTTC CCGATGCCCG CACCCTCGTG
CTGTCGAGCG ATCTGGTGAC CTCGATCGAA ACCATGCGCT CGGAACTGAA CGATATCGCG
GAGGGCCGCG TCGATATCAT CATCGGCACG CAACTGGTGG CCAAGGGCCA TCACTTTCCG
CGTCTCAACC TTGTCGGCGT CATCGACGCC GACCTCGGCC TTGGCAACGG CGATCCCCGC
GCTGCGGAGC GGACCTTCCA ACTGCTCAAC CAGGTGATCG GCCGCACCGG CCGCGAGCAG
GGCCACGGCG TCGGCTATCT GCAAACCCAT CAGCCCGAAC ATCCGGTGAT GAGGGCACTG
GTCGCAAGCG ACCGCGAGGC GTTCTACGCC AGCGAGATCG AGGCGCGGGA GCGCTCGGGC
TATCCGCCGT TCGGCCGGCT GGCGAGCCTG ATTATTTCCG CAGGCGACCG CCCGACCGCG
GAGAGTTTTG CCCGCCGCTT GGCGGCGATC GCGCCGATCG ACGAGCGCAT TCAGGTGCTC
GGGCCGGCCG AGGCACCGCT CGCTGTGATC AAGGGCCGCT ATCGTTTCCG GTTGCTGGTG
AAGTCGGCGC GCGGCGTCGA TCTGTCCGGC TATTTGCGCG AATGGCTCGC TGCAGGACCG
AAGACCAAAG GCAATCTCAA GCTGGAGATC GACGTCGATC CCCAGAGCTT TCTCTGA
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| Protein sequence | MDHFSRNGTS STPSSTTRVV DVLVPVAIDQ AYSYRVPRGM EVAPGDLVTV PLGPREVIAV
VWAENPAPDP RLHNRLKDIG EKLDLPPLKD ELRTLVDWVA NYTLSARGMV MRMSLRMGEQ
LGPERVRPGV RLTGAPPQRM TPARQRLIAV LSDGLLHGKS DAAKEAGVSA GVVDGLVDER
TLTVEPMPRP PPPPPPDPDF AVPDFSRSQR TAVDAMRALA SNGTFHVALL DGVTGSGKTE
VYFEAVAETI RRGKQALILM PEIVLTGQFR DRFAARFGER PLEWHSELTP RTRARNWAAI
AAGEGQVVVG ARSALFLPYA DLGLIIVDEE HDQAYKQDEG THYHARDMAV VRAHIAKIPI
VLASATPSVE SEVNARKGRY QRVALTSRFG GQHMPQIEVI DLRREGPPRG RFISPRLAGE
VRAAIERREQ ALLFLNRRGY APLTLCRACG HRFACTICDA WLVDHRFRQR LVCHHCGFSM
PRPHQCPHCA AEETLVAVGP GVERLQEEAA ALFPDARTLV LSSDLVTSIE TMRSELNDIA
EGRVDIIIGT QLVAKGHHFP RLNLVGVIDA DLGLGNGDPR AAERTFQLLN QVIGRTGREQ
GHGVGYLQTH QPEHPVMRAL VASDREAFYA SEIEARERSG YPPFGRLASL IISAGDRPTA
ESFARRLAAI APIDERIQVL GPAEAPLAVI KGRYRFRLLV KSARGVDLSG YLREWLAAGP
KTKGNLKLEI DVDPQSFL
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