Gene Nham_0534 details

Gene Information

• Locus tag: Nham_0534
• ID: 4030826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 589953
• End bp: 590462
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637969064
• Product: rare lipoprotein A
• Protein accession: YP_575884
• Protein GI: 92116155
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCACT CGCAAAAATC GACGTTGGGG TTTTTAATCC GGCCGCGTAC GGTGGCCGCC 
GTGATCGCCG CAACCGTTTT GATTGCGGGG AGCGTGACCG AGGCATCGGC CCGCTCGCGC 
AACCATCATC GGCATCATCA CGACCGGGCA CATCATGCCG CGAGCCACGG CACAGCGGGG 
TCGTCCTGGC TGAACGCCAA CGCGTCCGTT GGGCGTTCCG CCGGTGCGGG CCGCTCGTTC 
TCCGGCGTGG CCTCCTATTA CGGCAGTGAA TCCGGCAGCC GCACCGCGTC CGGCCAGCGC 
TTCAACCAGA ACGCCATGAC CGCCGCCCAT CGCAGTCTAC CGTTCGGGAC CAAACTGAGG 
GTCACCCATG GCAGCCGCAG TGTGGTCGTC ACCATCAATG ATCGCGGCCC GTTCATCCGC 
GGCCGCGTGC TGGATCTTTC GAAAGGTGCC GCCCGCGCGA TCGGGTTGAC CGGCCGCGGC 
GTCGGCCGCG TGGTCGCCGA GGTGATGTAG 

 

Protein sequence

MLHSQKSTLG FLIRPRTVAA VIAATVLIAG SVTEASARSR NHHRHHHDRA HHAASHGTAG 
SSWLNANASV GRSAGAGRSF SGVASYYGSE SGSRTASGQR FNQNAMTAAH RSLPFGTKLR 
VTHGSRSVVV TINDRGPFIR GRVLDLSKGA ARAIGLTGRG VGRVVAEVM