Gene Nham_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0533 
Symbol 
ID4030825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp588748 
End bp589308 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID637969063 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_575883 
Protein GI229118943 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGCTG TAGATTCCTC GGTTTCTGGT GTGTCCGGCC GTTATGCGAC GGCCCTGTTC 
GAACTGGCCC GCGAAGACAA ATCGATCGAC GCCGTCAAGG CCGACCTCGA CAGGTTCGAT 
GCCATGCTGG CGGACAGCCC TGAACTGGCC CGCCTGGTGC GCAGCCCGGT TTTCAGCGCC 
GATACGCAGG CCAAGGCGCT CGCCGCCGTG CTCGACAAGG CCGGGTTCGG CGGCACGACC 
GCGAAATTCC TGAAAGTCCT GACCGCCAAC CGCCGGCTGT TTGCGGTCAC TGAGGTGATC 
CGGGCATTCC GCGCGCTCGT CGCGAGGTTC AAGGGCGAGG TCACGGCGGA GGTCACCGTC 
GCCGAAACGC TCAATAAGAA GAATCTGGAC GCGCTGACGA CCGCGCTGAA ATCAGTGACG 
GGCAAGGACA TCACGCTCAA CGTGAAGGTC GATCCGTCCA TCATCGGCGG GCTTGTCGTC 
AAGCTCGGCA GCCGCATGGT GGACAGTTCG CTCCGCACCA AACTCAATTC GATCAAGCAC 
GCGATGAAAG AGGCAGGCTG A
 
Protein sequence
MAAVDSSVSG VSGRYATALF ELAREDKSID AVKADLDRFD AMLADSPELA RLVRSPVFSA 
DTQAKALAAV LDKAGFGGTT AKFLKVLTAN RRLFAVTEVI RAFRALVARF KGEVTAEVTV 
AETLNKKNLD ALTTALKSVT GKDITLNVKV DPSIIGGLVV KLGSRMVDSS LRTKLNSIKH 
AMKEAG