Gene Nham_0528 details

Gene Information

• Locus tag: Nham_0528
• Symbol: atpC
• ID: 4029977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 583625
• End bp: 584032
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637969058
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_575878
• Protein GI: 92116149
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.835042
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACCT TCCACTTTGA TCTCGTGTCG CCTGAAAAGC TCACCTTCTC CGGTGACGTC 
GATCAGGTCG ACGTTCCCGG CGTCGAGGGC GACTTCGGCG TCCTTGCCGG CCATGCGCCG 
GTTGTCGCGG CGATCCGTCC GGGAATCCTG ACCATCACCA CTGGCGGCAC GCCTCAGAAA 
ATCATCGTGC TCGGCGGTCT CGCCGAAGTA TCGGAGAAGG GCCTGACCGT CCTCGCCGAC 
GTGGCGACTT CGATCCAGGA GCTGGATCGT GCGCAGTTCG CCGACACGAT TGCGAGCATG 
GAGGCCAAGC TGGCGGAAAA GGAAGGCTCC GAACTCGACA AGGCGATCGA GCGGCTGGAT 
CATTTCAAGA GCATTCAGAG CCAGCTCAAT ACTACGGCGC TGCACTGA 

 

Protein sequence

MATFHFDLVS PEKLTFSGDV DQVDVPGVEG DFGVLAGHAP VVAAIRPGIL TITTGGTPQK 
IIVLGGLAEV SEKGLTVLAD VATSIQELDR AQFADTIASM EAKLAEKEGS ELDKAIERLD 
HFKSIQSQLN TTALH