Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0525 |
Symbol | |
ID | 4029974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 580054 |
End bp | 581409 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969055 |
Product | carboxyl-terminal protease |
Protein accession | YP_575875 |
Protein GI | 92116146 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.29494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCGCA AGGTTTCCCT TATTCTTCTC AGCGCTGCCG CGGGTGCGGC GCTGACGCTG TTCGTGACCC AGCCGCGGTC GGTGCTGATG GGATCGAGCG CGCGAGCCGC GACCTCGGAT ACCTATCGCC AGCTCAACCT GTTCGGCGAT GTGTTCGAGC GGGTCCGTAG CGACTATGTC GAGAAGCCCG ACGACAGCAA GCTGATCGAA TCGGCCATCA GCGGAATGCT GTCGGGTCTC GATCCGCATT CGAGCTACAT GGACGCCAAG AGCTTCCGCG ACATGCAGGT GCAGACGCGC GGCGAGTTTG GCGGCCTTGG CATCGAGGTC ACGATGGAGG ACGGCCTGGT CAAGGTGGTC TCGCCGATCG ACGACACGCC GGCATCCAAG GCGGGAATCC TGGCGAACGA CATCATCACC AATCTTGACG ATGAGGCGGT GCAGGGGCTC ACGCTCAACC AGGCCGTCGA CAAGATGCGC GGCCCGATCG GCACCAAGAT CAAGCTGAAG ATCGTCCGCA AAGGCCAGGA CAATCCGATC GACGTGACGC TGGTGCGCGA CAACATCCGC GTCCGCTCGG TGCGCTCGCA CGTCGAGACC GACGACATCG CCTATATCCG CATCACCACC TTCAACGAGC AGACCACCGA AGGCCTCAAG AAGTCGATTT CCGACCTGCA AGGCCAGATC GGCGACAAGC TCAAGGGTTA CATCATCGAT CTGCGCAACA ACCCCGGCGG ATTGCTCGAA GAAGCGGTGA CCGTTTCCGA CAGCTTCCTC GACCGCGGTG AGATTGTGTC GACGCGCGGC CGCAACGCCG AGGAAACCCA GCGTCGCAGC GCGCATCCCG GCGACCTCAC CAAGGGCAAG CCGGTGATCG TTCTGATCAA CGGCGGGTCG GCATCGGCTT CCGAAATCGT CGCCGGTGCG TTGCAGGACC ACAAGCGAGC GACACTGATC GGGACCCGCT CATTCGGCAA GGGCTCCGTG CAGACCATCA TTCCGCTCGG TTCGGGCAAC GGCGCGCTCC GCCTGACGAC GGCGCGCTAT TACACGCCGT CGGGCCGTTC GATTCAGGCC AAAGGCATCG TTCCGGATAT CGAGGTGCTT CAGGATGTGC CCGATGAACT GAAGTCGCGG ACCGACACCA AGGGAGAGGC TTCGCTGCGC GGCCATCTGC GCAACGGCAC CGACGAGAAG ACCGGCTCGC AATCCTACGT CCCGCCGGAC GCCAAGAACG ACAAGGCGCT CAAGATGGCC GACGACCTTC TGCACGGCAT CAAGGTCAAC GCCTCGTCGC CGGCCCCCGG CGACAAGGCG GCGATCGAGA AGCCCGCGAA AAAGGCAACG AACTGA
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Protein sequence | MMRKVSLILL SAAAGAALTL FVTQPRSVLM GSSARAATSD TYRQLNLFGD VFERVRSDYV EKPDDSKLIE SAISGMLSGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLVKVV SPIDDTPASK AGILANDIIT NLDDEAVQGL TLNQAVDKMR GPIGTKIKLK IVRKGQDNPI DVTLVRDNIR VRSVRSHVET DDIAYIRITT FNEQTTEGLK KSISDLQGQI GDKLKGYIID LRNNPGGLLE EAVTVSDSFL DRGEIVSTRG RNAEETQRRS AHPGDLTKGK PVIVLINGGS ASASEIVAGA LQDHKRATLI GTRSFGKGSV QTIIPLGSGN GALRLTTARY YTPSGRSIQA KGIVPDIEVL QDVPDELKSR TDTKGEASLR GHLRNGTDEK TGSQSYVPPD AKNDKALKMA DDLLHGIKVN ASSPAPGDKA AIEKPAKKAT N
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