Gene Nham_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0507 
Symbol 
ID4029935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp561346 
End bp562125 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID637969035 
ProductCarD family transcriptional regulator 
Protein accessionYP_575857 
Protein GI92116128 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0122387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGCA AGACTGCCAG AATTCCCGCC AAAGCCACTG CTTCGAAGAC CGCCGCTTCG 
AAGACCGCTG CTGCCTCGAA GGCAGGTTCC AGAACCGCGA CCAGGCCGGC TGCAAAACCC
GCATCGAAAA CTGCGGTGGC CGGCAAGTCT GCCGTCAAGG CTGGCGCGCC CCGTGTCGAT
GAACCGAAGA AGGTTCTGAC CCAGCGCCAG GGGTTCAGGA CCAACGAGTT CGTGGTCTAT
CCGGCGCATG GCGTCGGTCA GATTCTGGCG ATCGAAGAAC AGGAGATCGC GGGCGCCAGG
CTCGAACTGT TCGTCATCAA TTTCATGAAG GACAAGATGA CCCTGCGGGT GCCGACTGCG
AAGATCGCGA ATGTCGGCAT GCGCAAGCTG TCGGAGCCGG GGTTGGTCAA GCGGGCGCTC
GAAACGTTGA AGGGCCGTGC GCGCATCAAG CGCACCATGT GGTCGCGGCG TGCGCAGGAA
TATGAAGCCA AGATCAATTC GGGGGACATC GTTGCGATCG CCGAAGTGGT CCGCGATCTC
TATCGCTCGG AATCGCAGCC GGAGCAATCC TACAGCGAAC GTCAGCTCTA CGAAGCCGCG
CTCGATCGCC TGTCGCGCGA GATCGCCGTC GTCCAGCACG TGACGGAAAC CGAGGCGGTC
AAGGAAATCG AAGGGCAGCT CGCCAAGAGC CCGCGCCGCG GCGCCAAGGC GGAGTCGGAC
GCCGAGACCG ATGCCGACGC CGATGGCGAC GACGCGACGG TGGCCGATGA AGCTGCGTAG
 
Protein sequence
MPSKTARIPA KATASKTAAS KTAAASKAGS RTATRPAAKP ASKTAVAGKS AVKAGAPRVD 
EPKKVLTQRQ GFRTNEFVVY PAHGVGQILA IEEQEIAGAR LELFVINFMK DKMTLRVPTA
KIANVGMRKL SEPGLVKRAL ETLKGRARIK RTMWSRRAQE YEAKINSGDI VAIAEVVRDL
YRSESQPEQS YSERQLYEAA LDRLSREIAV VQHVTETEAV KEIEGQLAKS PRRGAKAESD
AETDADADGD DATVADEAA