| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0501 |
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| Symbol | |
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| ID | 4029929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 553559 |
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| End bp | 554440 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969029 |
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| Product | patatin |
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| Protein accession | YP_575851 |
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| Protein GI | 92116122 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGTCT TAATGTCTTC GTCCGGCAAT TCATCCCGCA AAACCGCCTT CGTGTTCGCG
GGCGGCGGCA GTTTCGGCGC CATCCAGGTC GGCATGATGC ACGCGCTCGC CGCCCATGGC
GTGGTTGCGG ACATGGTGGT GGGATCGAGC GTCGGGGCCT TGAACGGCGC CTATTACGCC
GGCGTCCCGA CCCTCGACGG TGCGAAGCAT CTCGCGGACA TCTGGCGCGG CTTGCGTCGC
GAGGACGTGT TCCCGGTGTC GATCTGGACC CTGCTTGAAT TTTTCTGGCG GCGAGATTTT
CTCATCTCCC ACGATGGCGT GCGCAAATTG ATCGACGATC ACTTGCCGTA CAAGAATCTT
GAGGATGCGA AGCTGCCGGT GCATATCGTC ACCACCAATA TCGTGACCGG CGGCAGCGTC
GTGCTGTCGG ATGGTCCAGC GGCAGAGGCG ATCGTGGCGA GCACGTCGAT TCCGGGGGTA
TTCGCCCCGG TCCTGCACAA GGGCATGTAT CTCGCGGACG GCGCGATTTC GAGCAACACG
CCGGTCAACG TGGCGATCGA GAAGGGCGCG CGGCGGCTCG TCGTCCTGCC GACCGGGTTC
GCCTGCGCGG GCGATGCGCC GCCCAAGGGG GCGGTTGCCA ACGTGCTGCA CGCCGTGACG
CTCTTGATCT CGCGGCAGGT GATCGACGAT CTCGAATATA TCGACCCCTC GGTCGAATTC
CATGTGGTGC CACCGCTGTG CCCGCTGGTC GGCTCGGCCT ATGATTTCTC GCGCACCGAC
GAGCACATCG AGCGGGCGAT CAGGAAGACC GAGCAATGGA TCGCAGGGGG TGGGCTCGAG
CAGCACGGCA TTCCCGGCGA AATGCGGCCG CACGCGCATT GA
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| Protein sequence | MSVLMSSSGN SSRKTAFVFA GGGSFGAIQV GMMHALAAHG VVADMVVGSS VGALNGAYYA
GVPTLDGAKH LADIWRGLRR EDVFPVSIWT LLEFFWRRDF LISHDGVRKL IDDHLPYKNL
EDAKLPVHIV TTNIVTGGSV VLSDGPAAEA IVASTSIPGV FAPVLHKGMY LADGAISSNT
PVNVAIEKGA RRLVVLPTGF ACAGDAPPKG AVANVLHAVT LLISRQVIDD LEYIDPSVEF
HVVPPLCPLV GSAYDFSRTD EHIERAIRKT EQWIAGGGLE QHGIPGEMRP HAH
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