Gene Nham_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0499 
Symbol 
ID4029927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp550159 
End bp552096 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content67% 
IMG OID637969027 
Productcobalt chelatase, pCobT subunit 
Protein accessionYP_575849 
Protein GI92116120 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) 
TIGRFAM ID[TIGR01651] cobaltochelatase, CobT subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGAA GGAAAACGGC CAACGCATTC ATGAGCACCA CACCGCCGAG CAACAGGTTC 
CGTACCGGGC CGAAGGAAGC GCCGAGCGAG CCGTTCAAGC GCGCGGTCGC GTCCTGCCTG
CGCGCCATCG CCCGGCAATC CGAACTTGAG GTGACGTTTG CCGCCGAGCG GCCCGGCCTG
TCGCCGGGCA AGGCGCGACT GCCGGAGCCC GGGCGCAAAA TGAGCAAGCG CGACGCCGCC
GTCGTACGGG GGCATGCGGA TTCCATCGCG CTGAAGATCG CCTGCCACGA TCCGAAGGTG
CATCGCAGGC TGATGCCCGG CAATCCGCAG GCGCGCGGCG TGTTCGACGC GGTGGAGCAG
GCGCGGGTCG AGGCCGTCGG CTCACGCCGG ATGACAGGCG TAGCAAAGAA TCTGACGGCG
ATGCTCGACG ACCATTTCCA TCGCGGCAAG TATGACGAGA TCACCGATCG CGCCGACGCG
CCGCTGTCGG ATGCGCTGGC GATGATGGTG CGCGAGCGGC TGACCGGTCT GCCGCCGCCC
GCCGCCGCGC GCAAGATGGT CGATCTGTGG CGTCCGTTCC TGGAAGACAA GATCGGCACC
CGGCTGGATC GGCTCTGCCA CCTCACCGAG GATCAGGCGA AGTTCGGCGA CGTCGTGCAC
GACCTGCTGG CGGCGCTCGA TCTCGGCGGC GACACCAACG CCGAGGCCGA CAAGGACGAG
ACCCAGGACG ACGACCGCGA AAGCGAGAGC GATCAGTCCG GGGCGGAGGG TTCGGCCGAC
AGCGACGCCG TGCAGGAGAT GAGCGCGGAT CAGGCGCAGG AGACCACCGA CGAGATGTCG
GACAGCGCCA TGGAAAGCGC GCAGGCTTCT GCCAGCGATA GCTTCGACGA TGGCGATCTT
GGCGACGACG AGACGCCGGG TGAGGCGACG CGGCCCAACG CCAGGGGCGG CAACGAGCCG
CGCGGCCCGG AATATCACGC TTTCGCGCCC AAGTTCGACG AGGTGATCGC GGCGGAGGAC
CTCTGCGATC ATGACGAACT GGAGCGGCTG CGCAGCTATC TCGACAAGCA GCTCGCGCAC
CTGCAGGGCA TCGTGGCGCG GCTCGCCAAC CGCCTGCAGC GGCGCCTGAT GGCGCAGCAG
AACCGCGCCT GGGAGTTCGA TCTCGAGGAA GGCATTCTCG ATCCGGCACG GCTGGCGCGC
GTGGTGATCG ATCCCTATCA GCCGCTATCG TTCAAGCACG AGAAGGAGGC GACCTTCCGC
GACACCGTGG TGACGCTGCT GCTCGACAAT TCCGGTTCGA TGCGCGGGCG GCCGATCACG
GTGGCCGCGA CCTGCGCCGA CATTCTGGCG CGAACGCTGG AGCGTTGCGG CGTCAAGGTG
GAGATTCTCG GCTTCACGAC GCGGGCGTGG AAGGGTGGGC AGTCGCGCGA AGCGTGGCTT
GCCGCCGGCA AGCCGGTCGC GCCGGGGCGT CTCAACGATC TCCGCCACAT TATTTACAAG
TCGGCGGATG CCCCCTGGCG GCGGGCGCGG AAAAACCTCG GGCTGATGAT GCGTGAGGGC
CTGCTCAAGG AGAACATCGA CGGCGAGGCG CTGGACTGGG CGCACAAGCG GCTGCTGGCG
CGCGGCGAAC AGCGCAAGAT TCTGATGATG ATCTCGGACG GCGCGCCGGT CGACGATTCC
ACGCTATCGG TCAATCCCGG CAACTATCTC GAACGCCACC TGCGCTGGGT GATCGAGGAA
ATCGAGACTC GCTCGCCGGT CGAACTGATC GCGATCGGCA TCGGCCACGA CGTCACGCGC
TATTATCACC GCGCGGTAAC CATTGTGGAT GCGGAAGAAC TCGGCGGCGC CATCACCGAA
CAGCTTGCCG AACTGTTCAG CGAGACGCAC GATCCGCCGG AGCCTCCGGC GCGGCGGCCG
CGCAGGCTGC ATTCGTAG
 
Protein sequence
MERRKTANAF MSTTPPSNRF RTGPKEAPSE PFKRAVASCL RAIARQSELE VTFAAERPGL 
SPGKARLPEP GRKMSKRDAA VVRGHADSIA LKIACHDPKV HRRLMPGNPQ ARGVFDAVEQ
ARVEAVGSRR MTGVAKNLTA MLDDHFHRGK YDEITDRADA PLSDALAMMV RERLTGLPPP
AAARKMVDLW RPFLEDKIGT RLDRLCHLTE DQAKFGDVVH DLLAALDLGG DTNAEADKDE
TQDDDRESES DQSGAEGSAD SDAVQEMSAD QAQETTDEMS DSAMESAQAS ASDSFDDGDL
GDDETPGEAT RPNARGGNEP RGPEYHAFAP KFDEVIAAED LCDHDELERL RSYLDKQLAH
LQGIVARLAN RLQRRLMAQQ NRAWEFDLEE GILDPARLAR VVIDPYQPLS FKHEKEATFR
DTVVTLLLDN SGSMRGRPIT VAATCADILA RTLERCGVKV EILGFTTRAW KGGQSREAWL
AAGKPVAPGR LNDLRHIIYK SADAPWRRAR KNLGLMMREG LLKENIDGEA LDWAHKRLLA
RGEQRKILMM ISDGAPVDDS TLSVNPGNYL ERHLRWVIEE IETRSPVELI AIGIGHDVTR
YYHRAVTIVD AEELGGAITE QLAELFSETH DPPEPPARRP RRLHS