Gene Nham_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0486 
Symbol 
ID4029858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp537367 
End bp538875 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content65% 
IMG OID637969014 
Producthypothetical protein 
Protein accessionYP_575836 
Protein GI92116107 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.511704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGG GGTACAGTTT TGCCCGTTGC TTGCGGAGCT TTGCTTTGAT CCGGCGCACG 
ATCGTTCGCG CGGTCATGAT GTCGGCCGTG CTGGCGTCCG GCGCGTTTCT TGCCGGCTGC
AATGGCAACG ACGCTTCACT TGCGAGCAAC GCCAAGGCCA ACCAGCCCGT TCCGCCAAAA
CTCGTCGCCG CCATGACCGA AAAGGACATG GAGCTGCAGT CGCCGATCCT GATCCGCCTG
TTCAAGCAGG AAGCCGAGCT CGAGGTCTGG AAGCAGAACC GCTCCGGCAA GTTCGCCTTG
CTCAAGACCT ACCCGATCTG CCGCTGGTCC GGCGATCTCG GCCCGAAGAC GCGCGAAGGC
GACCGCCAGG CGCCGGAAGG GTTCTACAGC ATCTCGCCGG CGCAAATGAA TCCGCGCTCC
GCCTACTATC TCTCATTCAA TACCGGCTAT CCCAACGCCT TCGACAAGTC TCTGGGGCGC
ACCGGGTCCG AGCTGATGGT GCACGGCGAC TGCTCCTCGC GCGGCTGCTA TGCCATGACC
GACGAGCAGA TCGCGGAAAT CTACGCGCTC GGCCGCGAGT CGTTCTTCGG CGGCCAGCAC
GCCTTCCAGT TTCAGGCCTA TCCGTTCCAC ATGACGCCGG TGAATCTTGC GAAACACCGC
AACAATCCGA ACATGCCGTT CTGGAAAATG ATCAAGGAAG GCAGCGATCA CTTCGAGGTC
ACGCATCAGG CGCCGAAGGT CGAGTTCTGC GAGCACAAAT ACGTATTCGA TCCGGCACCG
CCGCCCGGCT CCACCAGGCC GCTGGAGTTC AATGCCTCGG CGGCGTGCCC GGCCTATGTG
GTCCCCGACG ACATCGCGAG CGCCGTGCGC GAGAAGCAGC AGCGGGACAA TGCCGAGCTC
GCCAAGCTGA TCTCGAAGGG AACGCCGGTG GCCAAGCTCA ACACCGGGAT CGACGGCGGC
ATGAACCGCG TGTTCGCCGC CAAGCTCCCG GAGGGGCAGA CGGGGCTGTC GGATCCGGTT
GAACCCGGCC TGAAAAACAC GGCCTTCTCG CCGGCGCCAG GCACTATTCC GCCGACCGTC
AATCCGCCGC GCGGTTCGGC AGCGGCAACG GTCGCGACCT CATTCGAACC GGAGGCCGAC
GTGACGAGGC CGTCGTCATC GCTGCTCGCT CCCTCCCCAC CCAACAACAT CTTCACTAAC
CTCGCCAGCA AGATCGGTTT CGGAGCCGCC GACACCACCG CAACGACCAG GCAGCCCGCT
CCCGCCAAGC CGAAGACGGC CACTCCGGCG CGCAGCGCTC CGCATGGCCC GACCGTTGCG
GCGAAGCACG CTGCGCCCAG GAAGACGACC GAAACGGCGG CTGGCAAGGT GGCCAGGCCC
GAGCACGTCG CGACCGCGCG GCCGCCGTCC AAGCCCGCGG CCGCCACGGA TGCGCCGACC
CCCAATCCGG GTGCAGCGCC GGTGGCGTCA ACGGGTTCGT TCGACAGCCG CTTCTCGGCA
TTCCGGTAA
 
Protein sequence
MDLGYSFARC LRSFALIRRT IVRAVMMSAV LASGAFLAGC NGNDASLASN AKANQPVPPK 
LVAAMTEKDM ELQSPILIRL FKQEAELEVW KQNRSGKFAL LKTYPICRWS GDLGPKTREG
DRQAPEGFYS ISPAQMNPRS AYYLSFNTGY PNAFDKSLGR TGSELMVHGD CSSRGCYAMT
DEQIAEIYAL GRESFFGGQH AFQFQAYPFH MTPVNLAKHR NNPNMPFWKM IKEGSDHFEV
THQAPKVEFC EHKYVFDPAP PPGSTRPLEF NASAACPAYV VPDDIASAVR EKQQRDNAEL
AKLISKGTPV AKLNTGIDGG MNRVFAAKLP EGQTGLSDPV EPGLKNTAFS PAPGTIPPTV
NPPRGSAAAT VATSFEPEAD VTRPSSSLLA PSPPNNIFTN LASKIGFGAA DTTATTRQPA
PAKPKTATPA RSAPHGPTVA AKHAAPRKTT ETAAGKVARP EHVATARPPS KPAAATDAPT
PNPGAAPVAS TGSFDSRFSA FR