| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0485 |
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| Symbol | |
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| ID | 4029857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 534221 |
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| End bp | 537076 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969013 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_575835 |
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| Protein GI | 92116106 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGCG CGCTTGCCCG CAAGTTTTTC GGTTCCGCCA ACGATCGGCG GGTCAAGGGA
TACCAGGCCC GCGTCAAAGC CATCAACGGC CTCGAGCCCG AAATCGCCGC GCTGTCTGAC
GAGGCGCTGC GGGCGCGCAC CGCCGAATTC AGGCAGCAGC TCGCGGACGG CAAGACCCTC
GACGACATCC TCGTTCCCGC TTTCGCCACC GTGCGCGAGG CCGGCAAGCG AACCCTCGGT
CAGCGCCACT TCGACGTGCA GTTGATCGGC GGCATGGTGC TGCACGAGGG CGACATCGCC
GAGATGAAGA CCGGCGAAGG CAAGACGCTG GTCGCCACCC TTGCGGTCTA TCTCAACGCG
CTCGCCGGCA AGGGCGTCCA CGTCGTCACC GTCAACGACT ATCTCGCCAG CCGCGACGCC
GGCTGGATGG CGCAGATCTA CACCTTCCTC GGGCTGACCA CCGGCGTGAT CGTCCACGGT
CTCGACGATG TCGAGCGCAA GGCGGCCTAC GCCTGCGACA TCACCTACGG CACCAACAAC
GAATACGGCT TCGACTATCT GCGCGACAAC ATGAAATACC GGCTGGAGGA CATGGTCCAG
CGCGAGCACT TCTACGCCAT CGTCGACGAG GTCGACTCGA TTCTGATCGA CGAGGCGCGG
ACGCCGCTGA TCATTTCCGG CCCGCTCGAC GATCGCTCGG AATTCTACAA CACCATCGAC
ACCTTCATGC CGAACCTCGA GAAGGTGGCT GACTACGAGG TCGACGAAAA GCAGCGCACG
GTTGCGTTGA CCGAAGCCGG CATGGAGAAG ATCGAGACGC TGTTGCGCGA CGCCGGCCAG
CTCAAGGGCG ATTCGCTCTA CGACGTCGAG AACGTCTCCG TCGTCCACCA CATCAACCAG
GCGCTGCGCG CGCACTCGCT GTTCACGCGC GACAAGGACT ACATCGTCCG CGACGACGAG
GTCGTCATCA TCGACGAGTT CACCGGCCGC ATGATGCAGG GCCGCCGCTA TTCGGAAGGC
CTGCATCAGG CGCTCGAAGC CAAGGAACAC GTCACGGTCC AGCCGGAGAA CCAGACGCTG
GCCTCGATCA CGTTCCAGAA CTATTTCCGG ATGTACAAGA AGCTCTCCGG CATGACCGGC
ACGGCGCTGA CCGAGGCCGA CGAACTGGCC GACATCTACA AGCTCGAGGT CGTCGAAATC
CCGACCAACC TGCCGATCGC GCGCCTCGAC GAGGACGACG AGGTCTACCG GACCCAGAAC
GAGAAGTACG CCGCGATCCT GGCCGAGGTC GAGCGCGCCA ACGCCCGGAT GCAGCCGGTG
CTGGTCGGCA CCGCCTCGAT CGAGAAATCG GAAGTGCTCG CCGATTATCT GAAGAAGAAC
GGCTACAAGC TGATCGACTT CGGCGATCCC AAATCGATGC GGAAGTTGTA CGCGGCAGCC
CGCGCCGGCA AGCCGGCAAA ACTGTTCGCA GTGCTGAATG CCCGCTTCCA CGAGCAGGAA
GCCTATATCG TCGCCGAAGC CGGTGTGCCC GGCGCGATCA CCATCGCGAC CAACATGGCT
GGCCGCGGCA CCGACATCAA GCTCGGCGGC TCGCTGGAGA TGCGCGCCCA GTTCGAGACC
GCCGACCTCG CCGACGAGGC CGAGAAGGAC GCGAAGATCG CGGAAATCAA GGCCGATATC
GAACGCTTCC GGGACATGGT GCTCAAGGCC GAGGATGTCG TCGAGATCGA GCCGGCCAAG
GGCTCAAAGC CGGCCAAGAC CGTGACCCGG CCCGGCGGGC TCTACATCAT CGGTTCCGAA
CGTCACGAGT CGCGCCGCAT CGACAACCAG TTGCGCGGCC GCTCCGGCCG CCAGGGCGAT
CCGGGCCGCT CGAAATTCTT CCTGTCGCTG GAAGATGACC TGATGCGGAT TTTCGGATCG
GACCGGCTCG ACACCATGCT GCAGCGGCTC GGCCTCAAGG ACGGCGAGGC GATCACGCAT
CCCTGGATCA ACAAGGCGCT GGAGAAGGCG CAGCAGAAGG TCGAGGCGCG CAACTTCGAC
ATCCGCAAGA ACTTGCTGAA ATACGACGAC GTGCAGAACG ACCAGCGCAA GGTGATCTTC
GATCAGCGGG TCGATCTGAT GATGAACGAA AGCGTCGCGG AAACCGTCGC CGACATGCGC
CATGCGTTCG TCGACGACCT CGTCACCAAG CACGTGCCGG AAAACCAGTA TGCCGAGCAA
TGGGACGTCG CCGGCCTGAA AGAAGAGCTG AGGCGCGTGC TCGACATCGA TCTGCCAGTC
GACGAATGGG CCGCGGAAGA GGGCATCGCC GACGAGGAGT TGTTGTCGCG GATCGAGAAC
CGCGTCGACG AGCATATGGC GGCCAAGGTC GGGCAATGGG GTCCCGACGT CATGCGCTAC
GTCGAGAAAA CCATCCTGCT GCAGACCCTC GATCACCTCT GGCGCGAGCA TCTGGTGATG
CTCGATCATC TGCGCCAGGT CATCGGCCTG CGCGGTTACG GCCAGCGCGA TCCGTTGCAG
GAATACAAGT CGGAAGCCTT CTCTCTGTTC GAGGCCCTGA TTGCCCATCT ACGCGAGGCG
GTGACGGGAC AACTGATGCG CGTCGAGATC GTGCCGCCGG AGGAGGAGCA GCCGGTGCTG
CCCGCGATGG AAGTTCACAA GCTCGATCCC CATACCGGCG AGGACGAGAT GGCGTTTGCT
CAAGGTAATT TTGCCCAGGC CTCTCTGGCG CCGGTGGTGA GTGCGGACCG TTCCAGCCGC
GATCCGGGCA ATCCCGCGAG CTGGGGCAAG GTCGGCCGCA ATGAGGATTG TCCCTGCGGC
TCGGGCAAGA AGTACAAGCA TTGCCACGGC CGCTAA
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| Protein sequence | MIGALARKFF GSANDRRVKG YQARVKAING LEPEIAALSD EALRARTAEF RQQLADGKTL
DDILVPAFAT VREAGKRTLG QRHFDVQLIG GMVLHEGDIA EMKTGEGKTL VATLAVYLNA
LAGKGVHVVT VNDYLASRDA GWMAQIYTFL GLTTGVIVHG LDDVERKAAY ACDITYGTNN
EYGFDYLRDN MKYRLEDMVQ REHFYAIVDE VDSILIDEAR TPLIISGPLD DRSEFYNTID
TFMPNLEKVA DYEVDEKQRT VALTEAGMEK IETLLRDAGQ LKGDSLYDVE NVSVVHHINQ
ALRAHSLFTR DKDYIVRDDE VVIIDEFTGR MMQGRRYSEG LHQALEAKEH VTVQPENQTL
ASITFQNYFR MYKKLSGMTG TALTEADELA DIYKLEVVEI PTNLPIARLD EDDEVYRTQN
EKYAAILAEV ERANARMQPV LVGTASIEKS EVLADYLKKN GYKLIDFGDP KSMRKLYAAA
RAGKPAKLFA VLNARFHEQE AYIVAEAGVP GAITIATNMA GRGTDIKLGG SLEMRAQFET
ADLADEAEKD AKIAEIKADI ERFRDMVLKA EDVVEIEPAK GSKPAKTVTR PGGLYIIGSE
RHESRRIDNQ LRGRSGRQGD PGRSKFFLSL EDDLMRIFGS DRLDTMLQRL GLKDGEAITH
PWINKALEKA QQKVEARNFD IRKNLLKYDD VQNDQRKVIF DQRVDLMMNE SVAETVADMR
HAFVDDLVTK HVPENQYAEQ WDVAGLKEEL RRVLDIDLPV DEWAAEEGIA DEELLSRIEN
RVDEHMAAKV GQWGPDVMRY VEKTILLQTL DHLWREHLVM LDHLRQVIGL RGYGQRDPLQ
EYKSEAFSLF EALIAHLREA VTGQLMRVEI VPPEEEQPVL PAMEVHKLDP HTGEDEMAFA
QGNFAQASLA PVVSADRSSR DPGNPASWGK VGRNEDCPCG SGKKYKHCHG R
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