| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0469 |
|---|
| Symbol | |
|---|
| ID | 4030049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 518137 |
|---|
| End bp | 519090 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637968997 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_575819 |
|---|
| Protein GI | 92116090 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.667677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG CAAGGCGTAT GGGTCGCTGC TTGCGCGGGG ACGACGCCGG GCTTGTTGAG
GCAACGCGCG TGACCGAATC ATTCGCCGCA CAGACAATAG AGACCGCGCG ACGATTGCTG
ACGGCACGCC TCGAGGCCGC CGGGATCGAC AGCCCCGCGC TCGACGCTCG AATGCTGACC
GGCGCAGCGC TGCACCTCGA TCTCACCGGG CTGATCGCGC AAGGCCCGCG CCAGCTCACC
GCGGATGACG CGGCGTGCCT TGACGCTTTC GCGCGACGCC GTCTTGCCGG CGAGCCGGTG
GCGCGCATTC TCGGAACGAA GGACTTCTGG GGGCTGCCGC TCAAGCTGTC GGCGGACACG
CTGGTGCCGC GGCCGGATAC CGAAACCGTG GTCGAGGCTG CGCTCGAAAT CCTCCGTGCC
GAAGGCCGGA CCCGGACGCC GCTCCGCATC GCCGATCTCG GCACCGGCAG CGGTGCGATC
CTGCTCGCGC TGTTGAGCGA ACTGCCGGAC GCCACCGGCG TCGGCACTGA TCTGAGCGCA
GCGGCGCTCG ACACTGCGAA AGCCAATGCG CAACGCCTCG GTCTCGCGCC GCGCGCAGAC
TTCACGGTCA GCGACTATGC GGGGGGCCTG TCCGATCCGT TCGACCTGAT CGTCTCGAAC
CCACCCTATA TCCGCTCGGC CGATATCGCG TCTCTCGCGC CGGAGGTGCG CGACCACGAT
CCGCATCTCG CATTGGACGG CGGCAGCGAC GGGCTCGAAG CCTATCGCCG GATCGCGCCG
CAGGCGGCGG GGCTGCTAGC GCCCGGCGGA CTCCTCGTGC TGGAGGTCGG GCAGGGTCAG
GACGGCGACG TCGTCCGGCT GGTGGCCGCC GCAGGGTTAA CGGTCGCCGG GCCCGCGAGG
GCCGACCTCG CGGGCATCGG CCGCGCCGTC GCAGCCCGGA AATTGCCCTT TTAA
|
|---|
| Protein sequence | MNRARRMGRC LRGDDAGLVE ATRVTESFAA QTIETARRLL TARLEAAGID SPALDARMLT
GAALHLDLTG LIAQGPRQLT ADDAACLDAF ARRRLAGEPV ARILGTKDFW GLPLKLSADT
LVPRPDTETV VEAALEILRA EGRTRTPLRI ADLGTGSGAI LLALLSELPD ATGVGTDLSA
AALDTAKANA QRLGLAPRAD FTVSDYAGGL SDPFDLIVSN PPYIRSADIA SLAPEVRDHD
PHLALDGGSD GLEAYRRIAP QAAGLLAPGG LLVLEVGQGQ DGDVVRLVAA AGLTVAGPAR
ADLAGIGRAV AARKLPF
|
|---|
| |