Gene Nham_0457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0457 
Symbol 
ID4030036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp506940 
End bp507467 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID637968985 
Producthypothetical protein 
Protein accessionYP_575807 
Protein GI92116078 
COG category[R] General function prediction only 
COG ID[COG3577] Predicted aspartyl protease 
TIGRFAM ID[TIGR02281] clan AA aspartic protease, TIGR02281 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.530921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATC TGATGATTTT TGCCGCGCTT CTGATCGGTG CCGGCACCTA TATGGCGCAA 
CTGGCCGACA AGATGACCGC AACCGCGGCG GCGCGGGTCA CCACCCCCGC GCAGCAGACG
GCATTTACCG CGATTCAGGA TAACACCCAG GCCGATAGCC GCAGTGTCAG CATCGCACGC
GACGGCCGCG GCCACTTCCA GACCGAAGGC CGGATCGACG GCCAGCGCAT CGGCTTCATG
GTCGATACCG GTGCGTCGGT GATCGCGCTC AACGAAACCT CGGCGGCACG GATCGGCGTG
CGGCCCTCGC AAAACGACTA CACCACGCAG GTGACCACGG CCAACGGCAA GGTCAAGGCG
GCGCGCACCC GGCTCGCCAT GGTTGACGTC GGCGGTCTCA TCGTGCGCGA TGTCGATGCC
ATGGTGCTGC CTGACGAGGC GCTGTCGGAA AACCTGCTTG GCCTGTCGTT TTTATCCAGG
CTCAAGCGCT TCGAATTCGC GAACGGGCGG ATGCTGCTGG AACAATAG
 
Protein sequence
MRNLMIFAAL LIGAGTYMAQ LADKMTATAA ARVTTPAQQT AFTAIQDNTQ ADSRSVSIAR 
DGRGHFQTEG RIDGQRIGFM VDTGASVIAL NETSAARIGV RPSQNDYTTQ VTTANGKVKA
ARTRLAMVDV GGLIVRDVDA MVLPDEALSE NLLGLSFLSR LKRFEFANGR MLLEQ