Gene Nham_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0450 
Symbol 
ID4030085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp496543 
End bp497544 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID637968978 
Producthypothetical protein 
Protein accessionYP_575800 
Protein GI92116071 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCGC GTGCGAACTG GAAAGGCTTC TTGCGCCTTT CGCTCGTGAC CTGTCCGGTC 
GCCCTGTTTC CGGCGACCTC GGAGTCGGAG AAGGTCAGCT TCAACCAGAT CAATCGCAAG
ACCGGGCATC GCATCAAGTA TCAGAAAGTC GATGCCGAAA CCGGCGAGGA CGTCGACACC
GGGGACATCG TCAAGGGCTA CAAGATCGAC ACCGACAGCT ATCTTGAGGT GACCAGGGAC
GAACTGGACA ACATCGCGCT GGACTCCACC CACACCATCG AGATCGACCA GTTCGTGCCG
CGCGCCGAGA TCGACGACCT CTATATCGTC AGGCCTTATT ATCTCGTGCC GGACGGCAAG
GTCGGCCACG ACGCCTATGC CGTGATCCGC GACACCATCA AAACCACCGG CAAGATCGCG
CTGGCGCGGG TGGTGCTGAC CAATCGCGAG CATGTCATTG CGCTGGAGGC GCGCGACAAC
GGGCTGGTCG GCCTGCTGCT GCGCTATCCT TACGAGGTGC GCGACGCGGC CGATTATTTC
GACGTCATCA AGGACGCGAA AATCACCAAG GACATGCTCG ATCTCGCCAG GCATATCGTC
GAGCAGAAGT CTGGCCACTT CGAGCCGACC GCTTTCGAGG ATCACTATGA GGCGGCGCTG
CTCGACCTGA TCGAGCAGAA GAAGGCCGGG CACCCGATCG CGAAAGCCAA GGTCAGGACC
GAAGGCAACG TCATCAATCT GATGGACGCC TTGCGGCAGA GCCTCAAGAG CGGCAGATCT
GCACCGGCCG CAGGCGAGGC AGCTCCGGTG AAGGGCAAGA AATCCAGAAA GCGCGTCGAA
GGCCAGCGCG AGATGCTGTT TCCGATCGAG GGCAAGAAGG CCGCCGCGAA GGAGACCAAG
CGGAAGCCCG CGAAGCGCCC GGCCAAGACG TCTGGTGCGA AGACATCTAC CACGAAGACG
CCTGCTGCGA AGGCTTCCAC CGCGAAGCGC AAGGCCGGTT AG
 
Protein sequence
MAPRANWKGF LRLSLVTCPV ALFPATSESE KVSFNQINRK TGHRIKYQKV DAETGEDVDT 
GDIVKGYKID TDSYLEVTRD ELDNIALDST HTIEIDQFVP RAEIDDLYIV RPYYLVPDGK
VGHDAYAVIR DTIKTTGKIA LARVVLTNRE HVIALEARDN GLVGLLLRYP YEVRDAADYF
DVIKDAKITK DMLDLARHIV EQKSGHFEPT AFEDHYEAAL LDLIEQKKAG HPIAKAKVRT
EGNVINLMDA LRQSLKSGRS APAAGEAAPV KGKKSRKRVE GQREMLFPIE GKKAAAKETK
RKPAKRPAKT SGAKTSTTKT PAAKASTAKR KAG