| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0432 |
|---|
| Symbol | |
|---|
| ID | 4030126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 475782 |
|---|
| End bp | 477575 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637968961 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_575783 |
|---|
| Protein GI | 92116054 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCTC TGGATTCGGT CAGTCTGGCG ATCCTGCTCG GCGCGATTCT GGTCATGGCC
GGAATTCTGT CGAGCCTGCT GGCGCTACGG TTCGGCGCCC CCTTGCTGCT CGTCTTTCTG
TTCATCGGCA TGCTGGCAGG CGATTCCGGG CCCGGCGGCC TGATGTTCAG CGACGTCCAG
AACACCTACC TTGTCGGGTC GGCCGCGCTG GCGCTGATTC TGTTCGACGG CGGTCTGAAG
ACACGATTCC AGAGCATCCG CACGGTCCTG GCGCCCTCCA TGGTGCTCGC CACTCTCGGC
GTGCTGCTGA CCGCGCTGGT CACGGCGCCG GTGGCGAAAT ATGCGCTCGA CCTCAACTGG
ACCGAGGCGC TGCTGATCGG CGCGGTTGTC GCCTCCACCG ACGCGGCCGC GGTGTTTCTG
CTGGTGCATG CGCAAGGGCT GAGGCTGCGT CCGCGCGTCG GTGCGACGCT GGAAGCGGAG
TCCGGCACCA ACGATCCCTT CGCGGTGTTT CTGACGCTGA TGCTGGTGGA GCTGATCTCG
GTGGGTGACA GCTCGGTCTG GCATGTGGTG CTGGAATTCC TCAGGGAGTC GATGCTTGGC
GGTCTCGTCG GCGTGATCGG CGGGCGGCTT GTGGTCGCCG CGCTGAACCG TGTGGAGCTT
CCCCAGGGGT TGCATGCGCC GTTCGTCACG ACCGCGGCGC TCGTGATCTT CGGGGTGGCG
CAGATATTCC ACGCGTCCGG GTTTCTCGCG GTCTATCTTG CGGGAATTAT CATCGGCAAC
CATCCGACCC GCGCCCACAG ATCCGTTGTG ACATTCCTCG ATGCCGCTAC CTGGCTGGCG
CAGATCGTGA TGTTCGTGCT GCTCGGCTTG CTGGTCTCGC CGCACCGCCT GCTGGACAGC
GTCGTGCCGG CGGTGATCGT CGCGCTGGTG CTGATGCTGG TGGCGCGGCC GCTCGCGGTG
TTTCTCTGCC TCGCGCCGTT TCGTTTCAAC TGGCGGGAAA AGCTGTTCAT CGCCTGGACC
GGGCTGCGGG GCGCGGTCGC GATCTTCCTC GCCTCGATTC CGATGCTGGT CGGGTTGTCG
AAGGCCTATC TGTACTTCGA CGTCGCTTTC GTCGTGGTGA TCATCTCGCT GTTGCTGCAG
GGCTGGACGC TCGCCGCGGC CGCGCGGCGG CTGCATGTGG CGCTGCCGCG CGCCGACCGC
GGCCCGCGCC GCGTTGAACT CGATCTGCCG GGACAACTCG AACAGCAGTT GGTCGGCTAT
GCGGTGAGAC CGAAGAGCCT GTTCCTTCGG CGCGGGCTGA TTCCGTCATG GTCGAAGCCG
ACGCTCGTGA TCCGCAACGA GAAAATTCTG TCGCCGGCTG AAGCGGAGCC CATCGCGGCG
GGAGACTACC TCTATCTGCT GGCGCCGCCG GAAAAGGCCG AGGCGCTCGA TCGCTTCTTC
GTCGAAATGC AGCCGATGGC GCCGCCGGAC CCGCATCTGC TCGGCGATTT CCTGGTCTCG
GGCGAAACCA CCGTTGAGGA TATCGCGCAA ATCTACGGCA TCTCCGTCGA TCCGGCCGCC
GCGCGGCTGA CGCTGGCGGA TTACTTCGAC GTTCATCTCG ACCGCGCGCC GAAGGACGGC
GCGACCCTGC CGCTCGATAC CATCGTCCTT GTCGCGCGCA ACATCAGCGA AGGCCGCGTC
AACGCGGTCG GACTTCGGTT GCCTGAAGAC GAAGAGCAAC CGCCGCCGCT GACACGGATC
GGCGCATTCA GGCAGAAAAT GGCGGAAGCC TGGTCGTCGA TTGCGAGGAT ATGA
|
|---|
| Protein sequence | MASLDSVSLA ILLGAILVMA GILSSLLALR FGAPLLLVFL FIGMLAGDSG PGGLMFSDVQ
NTYLVGSAAL ALILFDGGLK TRFQSIRTVL APSMVLATLG VLLTALVTAP VAKYALDLNW
TEALLIGAVV ASTDAAAVFL LVHAQGLRLR PRVGATLEAE SGTNDPFAVF LTLMLVELIS
VGDSSVWHVV LEFLRESMLG GLVGVIGGRL VVAALNRVEL PQGLHAPFVT TAALVIFGVA
QIFHASGFLA VYLAGIIIGN HPTRAHRSVV TFLDAATWLA QIVMFVLLGL LVSPHRLLDS
VVPAVIVALV LMLVARPLAV FLCLAPFRFN WREKLFIAWT GLRGAVAIFL ASIPMLVGLS
KAYLYFDVAF VVVIISLLLQ GWTLAAAARR LHVALPRADR GPRRVELDLP GQLEQQLVGY
AVRPKSLFLR RGLIPSWSKP TLVIRNEKIL SPAEAEPIAA GDYLYLLAPP EKAEALDRFF
VEMQPMAPPD PHLLGDFLVS GETTVEDIAQ IYGISVDPAA ARLTLADYFD VHLDRAPKDG
ATLPLDTIVL VARNISEGRV NAVGLRLPED EEQPPPLTRI GAFRQKMAEA WSSIARI
|
|---|
| |