| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0430 |
|---|
| Symbol | radC |
|---|
| ID | 4030124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 473893 |
|---|
| End bp | 474657 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968959 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_575781 |
|---|
| Protein GI | 92116052 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGG CCGCGGCAAG GTTGCGGGAG CCAAGAAATG GTCCGCCGCG CCCAATGCCC
GCAGATGCCG ACAACCCCGC AGGATTTGCC GAAGCGCCGC ATTATCACGG CCATCGCGAG
CGGCTGCGGG AACGATTCCG CGACGCCGGA CCGGATGCGC TCAGCGATTA CGAATTGCTC
GAAATGGTGC TGTTTCGCGC GCTGCCCCGC CGCGACGTCA AGCCGCTGGC CAAGTCCCTG
ATCGGCCGAT TCGGATCGTT CGCCGAGGTG GTTCATGCGC CCGATGCCCG GCTCCGCGAG
ATCAGCGGGC TCGGCGAAGC GGCGATCATC GAGATCAAGC TGATCGCGGC GACCGCCAGC
CGCGTTGCCA AGGGACAACT GAAGCCGCGG ACGATGCTGT CGTCATGGAC CGCGGTGATC
GACTATTGCC GGGCCTCGAT GGCCTTCGCC GACAAGGAGC AGTTCCGCAT CCTGTTCCTC
GACAAACGCA ACCAGCTTAT CGTGGACGAA TTGCAGCAGG TCGGCACCGT CGATCACACG
CCGGTCTATC CGCGCGAGGT CGTCAAGCGC GCGCTCGAAC TATCGGCGAC CGCAATCATC
ATGGTGCACA ATCACCCCTC CGGCGATCCG ACGCCGTCGC AGGCCGACAT CCAGATGACC
AAATCGATTA TCGACATTTC GAAGCCGCTC GGGATTTCCG TGCACGACCA CATCATCGTC
GGCAAGAACG GCCACGCCAG CCTGAAAGGG CTGCGGCTGA TTTAG
|
|---|
| Protein sequence | MPPAAARLRE PRNGPPRPMP ADADNPAGFA EAPHYHGHRE RLRERFRDAG PDALSDYELL
EMVLFRALPR RDVKPLAKSL IGRFGSFAEV VHAPDARLRE ISGLGEAAII EIKLIAATAS
RVAKGQLKPR TMLSSWTAVI DYCRASMAFA DKEQFRILFL DKRNQLIVDE LQQVGTVDHT
PVYPREVVKR ALELSATAII MVHNHPSGDP TPSQADIQMT KSIIDISKPL GISVHDHIIV
GKNGHASLKG LRLI
|
|---|
| |