| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0418 |
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| Symbol | |
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| ID | 4030112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 459040 |
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| End bp | 461247 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968947 |
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| Product | Amylo-alpha-1,6-glucosidase |
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| Protein accession | YP_575769 |
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| Protein GI | 92116040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAA TCAAGGCCAC AGCTCAGATC ACGACCACGC AGTTATCCGA TGTTCTTGCG
GCGGAATCGC CGTTCTACAT TCCGATGACC GGGCCTTCTG CCCGCCCGCG CCGCACGTTG
AAGCACGATG ATACGTTCGT CGTGCTGGAC AGCCATGGCG ATATCGGAGC TTCCGCGGGA
GGACCCGACG GGCTGTTCAA TACCGACACG CGCTATCTTG CCCGGCTCGA GCTGGTTCTC
AACGACATGC AACCGCTGCT GCTCGGATCC AATCTGCGCA ACGATAATTC CGGCCTGACG
GTCGATCTGA CCAATCCGGA TATCTACGAC GGCGACAGGA TCGTATTTCA CAAGGATACC
ATCCATATCG TGCGCACGAT CTTTCTCTGG CGCGGGACCG CGTATCAGCG GATCGGCATC
CAGAACCACG GCGAGGGTAC CGCGAGCTTC GATCTCTCCC TGCTGTTCGA CAACGATTTC
GCCGATCTGT TCGAGGTGCG CGGCGAGCGG CGCGCGCGCC GCGGCGTCGG CACCGGCGAA
CTGTCCGACC CCGCCACCGT CGCTCTCTCC TACATCGGTC TCGATGACAT CATTCGGACC
TCGCGCCTGC ATTTCGATCC GCGGCCGACG CGCCTGACCG TCAACGGCGC GATCTATCAC
CTCGATCTGC CGCCGCAGCA GACCACCGCC ATATTCCTCG CCGTGTCCTG CAACAAGCCG
GCGACCGAGA AACCTGTTCC GTTCTATCGC GGATTGCTGG CGCATCGCCG CGAAATGCGG
CGCGCCTGGT CCGGTGCGAC CAACGTCGAA ACCTCGAACA ACATCTTCAA CGAGGTGCTG
TGCCAGTCGA TGGCCGATCT GAATATCCTG ATGACGCAGA CGCCGCACGG CCGCTATCCC
TATGCCGGCA TCCCCTGGTA CTCGACGACG TTCGGGCGGG ACGGGCTGAT AACGGCGTTG
CAGATGTTGT GGATCGACCC CGGCATCGCC CGCGGCGTTC TGAGGAGGCT CGCAGCGTTT
CAGGCGCAGG CCGTCGATCC CCTCGCGGAC GCGGAGCCGG GAAAGATTCT TCACGAGATG
CGCGGCGGAG AAATGGCCGC GCTACGCGAG GTGCCGTTCG CGCGATACTA CGGCAGCGTC
GATTCGACGC CGCTGTTTGT GCTGCTGGCG GGGCTTTACG TCGAACGCAC GGGCGACGAG
TCGATCCTCA AAGAGCTGTG GCCGGCGATC GAGGCGGCGC TGGGCTGGAT CGACGGCCCC
GGCGATCCGG ACGGCGACGG CTTCGTCGAG TATCGGCGCG CGTCCGAACA GGGGCTCCCC
AATCAGGGCT GGAAGGATTC GTTCGACGCC ATCTTCCATG CCGACGGCGC GCTTGCGGAA
GGCAATATCG CGCTCGCCGA GGTGCAGGGT TACGTCTTTG CCGCCAAGCG ATCGGCGGCG
CGGTGCGCGC GCGCGCTCGG TCTGACCGAC CGCGCGAGGG AACTGGAGCG CGCGGCGGAA
CGCCTGGCGT CGCGGTTCGA GGAAGCATTC TGGCTGCCGG ATCTGCGCAC CTACGCGCTG
GCGCTCGACG GAAAGAAACG GCCCTGCAAG GTACGGACAT CGAACGCCGG ACAGTTGCTG
TTCACCGGTC TGGTTGGCGA GGAGCGGGCG CGGATGGTCG CCGCCGACCT GATGCGGCCG
CCGCTCTTCA CTGGATGGGG GATCCGCACC GTTGCCAGCG GCGAGGCGCG CTATAATCCG
ATGTCCTATC ATAACGGTTC GATCTGGCCG CATGACAACG CGCTGATCGC GCTCGGGCTG
GCGCGATACG GCCTCAAGCA CTCTGTCGAG CATGTCTTCA AGGGCCTGTT CGATGCGGCC
ACCTACATGG ATTTGCGGCG GCTGCCGGAA CTGTTCTGCG GCTTCCGGCG CGAGCCGCGG
CGCGGGCCGA CGCTCTATCC CGTCGCCTGC TCGCCGCAGG CATGGGCGAG CGCGACACCG
TTCACGCTGC TGGAAGCGGC GCTGGGTCTG GAGTTCGATG CCGCAAGAAG CGAGATCAGG
CTGCGCAACC CGCGGCTTCC CGCATTCCTC AACGAGGTGA TCCTGCGCGG GCTGCATCTT
GGCGAATCCA GTGTCGATCT GCGACTGCGC CGTCACGATG AGGACGTGTC GCTCGAAGTG
TTGCGAACGC GAGGCCACAT TCAGGTGTCG ATCGTGCTGA CGCGCTAG
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| Protein sequence | MMAIKATAQI TTTQLSDVLA AESPFYIPMT GPSARPRRTL KHDDTFVVLD SHGDIGASAG
GPDGLFNTDT RYLARLELVL NDMQPLLLGS NLRNDNSGLT VDLTNPDIYD GDRIVFHKDT
IHIVRTIFLW RGTAYQRIGI QNHGEGTASF DLSLLFDNDF ADLFEVRGER RARRGVGTGE
LSDPATVALS YIGLDDIIRT SRLHFDPRPT RLTVNGAIYH LDLPPQQTTA IFLAVSCNKP
ATEKPVPFYR GLLAHRREMR RAWSGATNVE TSNNIFNEVL CQSMADLNIL MTQTPHGRYP
YAGIPWYSTT FGRDGLITAL QMLWIDPGIA RGVLRRLAAF QAQAVDPLAD AEPGKILHEM
RGGEMAALRE VPFARYYGSV DSTPLFVLLA GLYVERTGDE SILKELWPAI EAALGWIDGP
GDPDGDGFVE YRRASEQGLP NQGWKDSFDA IFHADGALAE GNIALAEVQG YVFAAKRSAA
RCARALGLTD RARELERAAE RLASRFEEAF WLPDLRTYAL ALDGKKRPCK VRTSNAGQLL
FTGLVGEERA RMVAADLMRP PLFTGWGIRT VASGEARYNP MSYHNGSIWP HDNALIALGL
ARYGLKHSVE HVFKGLFDAA TYMDLRRLPE LFCGFRREPR RGPTLYPVAC SPQAWASATP
FTLLEAALGL EFDAARSEIR LRNPRLPAFL NEVILRGLHL GESSVDLRLR RHDEDVSLEV
LRTRGHIQVS IVLTR
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