| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0416 |
|---|
| Symbol | |
|---|
| ID | 4030149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 455831 |
|---|
| End bp | 456898 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637968945 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_575767 |
|---|
| Protein GI | 92116038 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.552553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CGCAAGTTGC TCCGTTGACG GAGGCTGTTC CGCCGAAGCT GTATGGCGGC
ACTGAACGTG TAGTTCACTG GTTGACAGAG GAACTCGTGG CGCTGGGTCA TGACGTGACG
CTTTTCGCCA GCGGCGATTC TCGCACCTCG GCCCGGCTCG ATGCGACATG GCCGAAAGCC
TTGCGGCTCG ATGGCGCCGT GTGCGATCCG AACGCCCTGC ACATGGTGAT GCTGGAACGG
GTCCGCCGGA AATGCGACGA CGAGGAATTT GACTTCCTCC ACTTCCATCT CGACTACTAT
CCGTTCTCGC TGTTTTCGCG GCAGCCGACG CCCTTTCTCA CGACGCTTCA CGGGCGGCTC
GACCTTCCCG AGCATCAGCC GGTATTCACG GCATTTTCAT CAATTCCGGT GATTTCGATC
TCGAACGCGC AACGCCGCCC GGTGCCGCAG GCCCGCTGGC TCCGCACCGT TTATCATGGC
CTCCCGGAAA AGCTGCTGAC GCCGCGGCCG ACCACACCGG GCTATCTCGC CGTGCTCGGC
CGCATCGCTC CGGAGAAAGG CGTCGACCGG GCGATCAGGA TCGCCCTTCG ATGCGGCATC
CCGCTCAAGA TCGCCGCAAA AGTCGATCGC GCCGATCAGG ACTATTACGA TGAAGTCGTC
CGCCCGATGA TGGATCATCC CCTCGTGGAC TTTATCGGCG AGATCAGCGA CCACGAGAAG
CCGGATTTCC TCAGCGGCGC TATCGGGCTG CTGGTGCCGA TCGCCTGGCC TGAACCGTTC
GGCCTCGTCA TGATCGAGGC GATGGCGTGC GGAACGCCCG TCATCGCCTA CAATCGCGGC
TCGGTTGCCG AAATCATCGA GGATGGCCGG ACCGGTTTTA TCGTCGAGGA CGAAAACAGT
GCCGTCGCCG CCGTCGACCG GCTGGCGTCG CTCGATCGCG CAATCGTTCG CAAGGAATTC
GAGGCGCGTT TCACGGCACG GCGCATGGCG CTGGATTATC TCGATGCGTA TCACGACCTG
ATCGAGGCCG CGACGCCGAA GATCAAGCTG GTCAGCAGCG CCGAATAA
|
|---|
| Protein sequence | MRIAQVAPLT EAVPPKLYGG TERVVHWLTE ELVALGHDVT LFASGDSRTS ARLDATWPKA
LRLDGAVCDP NALHMVMLER VRRKCDDEEF DFLHFHLDYY PFSLFSRQPT PFLTTLHGRL
DLPEHQPVFT AFSSIPVISI SNAQRRPVPQ ARWLRTVYHG LPEKLLTPRP TTPGYLAVLG
RIAPEKGVDR AIRIALRCGI PLKIAAKVDR ADQDYYDEVV RPMMDHPLVD FIGEISDHEK
PDFLSGAIGL LVPIAWPEPF GLVMIEAMAC GTPVIAYNRG SVAEIIEDGR TGFIVEDENS
AVAAVDRLAS LDRAIVRKEF EARFTARRMA LDYLDAYHDL IEAATPKIKL VSSAE
|
|---|
| |