| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0409 |
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| Symbol | |
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| ID | 4030142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 451460 |
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| End bp | 452074 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637968938 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_575760 |
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| Protein GI | 92116031 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTT CAGGGCACGG CTTGCGGTGC GTACGAGGCG GACGGGAGGT GTTTTCCGGC
CTCGATGTCG CGGCGGAGTC CGGCCGGGCG GTGGCGATCA CCGGGCCCAA CGGCGCCGGG
AAAACCTCCC TGCTGCGGCT GCTGGCAGGG CTATTGGCGC TAGAGGGCGG GTCGATCGGC
CTTGAGGGCG GCGATCCTGA GCTGACGCTG CCCGAGCAGG CGCATTACCT TGGCCATCGC
GACGCCCTGA AACCCGCGCT CAGCGTCAGC GAAAACCTGT CGTTCTGGCG GGGGTTTCTC
GGCGGCGCGT CGCGGGCGTC GGGCCCCGAT GCCGCGCAAG CGCTCGCGGC GGTCGGGCTC
GATCATGTCG CGCATCTGCC GGCGGCCTAT CTCTCGGCGG GACAGCGGCG ACGGCTGTCG
ATCGCGCGGC TGCTGGCGGT GAAACGCCCG GTCTGGCTGC TGGACGAGCC GACCTCGGCG
CTCGACGTCG CCGGCCAAAG CGCCTTCGCC GCCATCATGA CCGGCCACCT TGCGGGCGGT
GGCATCATTC TGGCTGCGAC GCACACGCCG CTGGGCATTG CCGCGCGGGA ACTGCGGATC
GGGGGAACGA CGTGA
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| Protein sequence | MKLSGHGLRC VRGGREVFSG LDVAAESGRA VAITGPNGAG KTSLLRLLAG LLALEGGSIG
LEGGDPELTL PEQAHYLGHR DALKPALSVS ENLSFWRGFL GGASRASGPD AAQALAAVGL
DHVAHLPAAY LSAGQRRRLS IARLLAVKRP VWLLDEPTSA LDVAGQSAFA AIMTGHLAGG
GIILAATHTP LGIAARELRI GGTT
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