Gene Nham_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0407 
Symbol 
ID4030140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp447447 
End bp448244 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID637968936 
Producthypothetical protein 
Protein accessionYP_575758 
Protein GI92116029 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCGG CACACGTTGT GTCGCGGTTT CGGTGTAGCC CTATGATGAC TCATGGTTGT 
TTGTCGCGCC TGTCCGGCGC GCTCGGCGTG TGCGTGTTCG TCGCGATCAT TCGTCCCGCC
GAGGCGGGCC CGCGCGCGGT GGTCGAACTG TTCACGTCGC AGGGCTGCTC ATCGTGCCCG
GCGGCGGACA AGATTCTTGG CGACCTCTCC AGGGATCCCT CGATTGTCGC GCTGAGCATG
CCGATCGATT ACTGGGACTA TCTCGGTTGG AAAGATACGC TGGCCGACAA CCGCTTTACT
GCGCGCCAGA AGGCCTATTC GCAGATGCGC GGCGACCGCG ACGTCTACAC GCCGCAGGTG
ATCGTCAACG GATCGGCCCA TGTGATCGGC AGCGATCGCG CGGCCATCGA CAACGCAGTC
CGCGATACCA AGAAGAACGA TGACGTGATG TCGGTGCCGG TCTCGATGGC GGTGTCGGGA
CGGCAACTCA ATGTGTCGGT TGCGTCCGCC AGCGCCAATC ATCCTTCCGA TCACGGCGAA
GTCTGGATAT GTGCGATCTC GAAGGCGGTG CCGATTGCGA TCGGGCGCGG TGAGAACGGC
GGCCGCGAAG TGACCTACCA CAACGTCGTT CGAAGCTGGC TCAAGGTCGG CGACTGGACC
GGCAAGGCCG GGACCTGGGC GGTGCCGATG GAGAATATCG CGCAAGATGG CGTCGACGCC
GCGGTCGTCT ACGTTCAGGA CGGCAATCGC GACAGGCCCG GTCCGATGCT CGGTGCGGCC
TATACCTCGC TGCACTGA
 
Protein sequence
MAPAHVVSRF RCSPMMTHGC LSRLSGALGV CVFVAIIRPA EAGPRAVVEL FTSQGCSSCP 
AADKILGDLS RDPSIVALSM PIDYWDYLGW KDTLADNRFT ARQKAYSQMR GDRDVYTPQV
IVNGSAHVIG SDRAAIDNAV RDTKKNDDVM SVPVSMAVSG RQLNVSVASA SANHPSDHGE
VWICAISKAV PIAIGRGENG GREVTYHNVV RSWLKVGDWT GKAGTWAVPM ENIAQDGVDA
AVVYVQDGNR DRPGPMLGAA YTSLH