| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0401 |
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| Symbol | |
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| ID | 4030134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 442300 |
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| End bp | 443178 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637968930 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_575752 |
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| Protein GI | 92116023 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGC CCCAACTCAG CGCCGAACAA ATCCAGGCCC GCGTGCTCCA CCGCGACGGG
CTGATGCTGG TGATCGACAA GCCGGCCGGC ATCCCCGTGC ATCGCGGTCC CAAGGGCGGC
GCCAATCTCG AGGCGTCGTT CGAGGCGCTG CGGTTCGGCC TGCCGCGGCC GCCGGTGCTT
GCCCATCGGC TCGACCGCGA CACCTCGGGC TGTCTGGTGC TCGGACGTCA TCGCAAGGCG
ACGGCGTCGC TCGGCCTGCT GTTCAAGCAC GGCAAAATTT CAAAAACCTA CTGGGCCGTG
GTCGAGGGCG GCCCCACTGA GGACGAGGGC ACCATCGACA TTCCACTCGG ACGGCTGAAC
CACGAACGCG GCTGGTGGCA GAAGCCGGAC CCGAACGGGC TGCCGTCGGT GACAAGATGG
AAAGTACTGG GGCGCGGCAT TTTCACTGCG GCCAGCGATC GCTTCTCCCC TTCCCCTTGC
GGGGTCGAGA CGAGCGAAGC CCGTCCTGAG GGGGCGGGCG CGAGGGGCAA CAGTGACGGC
ATTGCACCAG ATCACCCCCC TCCCCGCGCA AGGGAGGAGG GAATTCAACT CACCTGGCTG
GCGCTGGAGC CGGTCACCGG CCGCACCCAT CAACTGCGCG TCCATTGTGC GGCGATGCGC
TGGCCGATCG CCGGCGACAA CATTTACGGA ACGCAGGCAA GTCTGCGCCG CCTGCGCAAT
GAACAATATA TCCCACAGTT CGGCGAACCC AGTCTGCATC TGCATGCGCG CGAGATCGCG
ATTCCCCTAT CGAAGAACAA ACCGCCCATC GTCGTCACCG CATCCGCGCC CGTGCATTTG
CACGCGCGAC TCAAGGCGTG CGGGTGGAAT GGGGAGTAA
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| Protein sequence | MDTPQLSAEQ IQARVLHRDG LMLVIDKPAG IPVHRGPKGG ANLEASFEAL RFGLPRPPVL
AHRLDRDTSG CLVLGRHRKA TASLGLLFKH GKISKTYWAV VEGGPTEDEG TIDIPLGRLN
HERGWWQKPD PNGLPSVTRW KVLGRGIFTA ASDRFSPSPC GVETSEARPE GAGARGNSDG
IAPDHPPPRA REEGIQLTWL ALEPVTGRTH QLRVHCAAMR WPIAGDNIYG TQASLRRLRN
EQYIPQFGEP SLHLHAREIA IPLSKNKPPI VVTASAPVHL HARLKACGWN GE
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