| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0393 |
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| Symbol | |
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| ID | 4030202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 435753 |
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| End bp | 436277 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637968922 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_575744 |
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| Protein GI | 92116015 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.559826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTCG ATGTCGCACG CTTGCTGCTG TTTCCAGCCC TGATGGCATT CGCGGCCGCC
AGCGACCTGC TCACCATGAC GATCTCCAAT CGGGTCTCGC TGCTTTTGGT GGCCGGCTTC
CTCGTGGTGG CTGCCCTGAG CGGCATGAGC CTTCACGACA TGCTGTTACA TGCCGGCGCC
GGCCTTGCTG TCCTGCTTGT CGCATTCACC TGTTTCGCGA TGGGCTGGGT CGGCGGCGGC
GACGCAAAAG TGGCGGCCGC GGCCGCCCTT TGGTTCGGCT TCGGACATCT GCTGGAGTAT
CTGGTCTATG CCTCGCTGTT CGGCGGAGCC CTGACGTTGC TGCTGCTCCA GTTCCGGCAA
TGGCCTCTGC CGGCGCTATT TTACAGTCAG GACTGGCTGC TCCGGCTGCA CGGCAAGGAT
ACGGGAATTC CCTACGGCAT CGCGCTCGCG CTTGGCGCCC TGCTGATCTA TCCGGAGACC
GGTTGGATCA AGGCGGTCGA TTTGGCGCGC TTTGCGCTTC ACTGA
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| Protein sequence | MALDVARLLL FPALMAFAAA SDLLTMTISN RVSLLLVAGF LVVAALSGMS LHDMLLHAGA
GLAVLLVAFT CFAMGWVGGG DAKVAAAAAL WFGFGHLLEY LVYASLFGGA LTLLLLQFRQ
WPLPALFYSQ DWLLRLHGKD TGIPYGIALA LGALLIYPET GWIKAVDLAR FALH
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