| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0392 |
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| Symbol | |
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| ID | 4030201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 434843 |
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| End bp | 435625 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968921 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_575743 |
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| Protein GI | 92116014 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.373428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACCG CACGCATTGT CGTCCTGACC ATCGCAGTCG GTGCCGGCGG CCTTGCCGCC
TATCTCGCGA GCGGATCCGA CAAGAAGCCG CAACCCGCGC AGACCGCGCA GCTCCAGACG
GTGGACGTTC TGGTCGCGAA ATCGGACATC CCGCTCGGAC AGGCGGTGAC CGCGAACGAC
GTGGCGTGGC AGGCCTGGCC CGCAAATAGC GCCAGCAGCA GCTTCATTCG CCGCGACCAG
CGTCCCGACG CCACCACGCA ACTGGCGGGA TCGATCGCCC GCTCGCCCTT CATCGCGGGA
GAACCCATTC GCGAACTCAA GCTGGTCAGC GCGAAAGGAT CCGGATTCAT GGCCGCGATC
CTGCCGACCG GGATGCGCGC GATCTCGACC GAAATTTCGC CCGAGACCGG CGCCGGCGGC
TTTATTCTCC CCAATGATCG CGTCGACGTG ATCCTCTCAC AACGAGACAA AAACCCGGAT
CATCCAAACG CGAACTCCGT CAATTCGGAG ACCATTCTCA GCAACGTGCG CGTTCTCGCG
GTCGACCAGA CCATCGAGGA GAAGAACGGG CAGAAGGTCG TGGTCGGCAA GACCGCGACG
CTCGAATTGA AACCGGAGCA GGCGGAGATG CTGGCGCGGT CGCGCCAGAT GGGAACGCTG
TCGCTGGCGC TGCGCAGCCT CGCCGACGCC AATGCCCCGG AGAGCAGCAC CGACGATCAG
AGGCGCGACA GCATCAATAT CGTCCGCTAC GGCGTTCCGA CCCAGACCAC CGTACAGAGG
TAA
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| Protein sequence | MNTARIVVLT IAVGAGGLAA YLASGSDKKP QPAQTAQLQT VDVLVAKSDI PLGQAVTAND
VAWQAWPANS ASSSFIRRDQ RPDATTQLAG SIARSPFIAG EPIRELKLVS AKGSGFMAAI
LPTGMRAIST EISPETGAGG FILPNDRVDV ILSQRDKNPD HPNANSVNSE TILSNVRVLA
VDQTIEEKNG QKVVVGKTAT LELKPEQAEM LARSRQMGTL SLALRSLADA NAPESSTDDQ
RRDSINIVRY GVPTQTTVQR
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