Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0392 |
Symbol | |
ID | 4030201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 434843 |
End bp | 435625 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637968921 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_575743 |
Protein GI | 92116014 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.373428 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACCG CACGCATTGT CGTCCTGACC ATCGCAGTCG GTGCCGGCGG CCTTGCCGCC TATCTCGCGA GCGGATCCGA CAAGAAGCCG CAACCCGCGC AGACCGCGCA GCTCCAGACG GTGGACGTTC TGGTCGCGAA ATCGGACATC CCGCTCGGAC AGGCGGTGAC CGCGAACGAC GTGGCGTGGC AGGCCTGGCC CGCAAATAGC GCCAGCAGCA GCTTCATTCG CCGCGACCAG CGTCCCGACG CCACCACGCA ACTGGCGGGA TCGATCGCCC GCTCGCCCTT CATCGCGGGA GAACCCATTC GCGAACTCAA GCTGGTCAGC GCGAAAGGAT CCGGATTCAT GGCCGCGATC CTGCCGACCG GGATGCGCGC GATCTCGACC GAAATTTCGC CCGAGACCGG CGCCGGCGGC TTTATTCTCC CCAATGATCG CGTCGACGTG ATCCTCTCAC AACGAGACAA AAACCCGGAT CATCCAAACG CGAACTCCGT CAATTCGGAG ACCATTCTCA GCAACGTGCG CGTTCTCGCG GTCGACCAGA CCATCGAGGA GAAGAACGGG CAGAAGGTCG TGGTCGGCAA GACCGCGACG CTCGAATTGA AACCGGAGCA GGCGGAGATG CTGGCGCGGT CGCGCCAGAT GGGAACGCTG TCGCTGGCGC TGCGCAGCCT CGCCGACGCC AATGCCCCGG AGAGCAGCAC CGACGATCAG AGGCGCGACA GCATCAATAT CGTCCGCTAC GGCGTTCCGA CCCAGACCAC CGTACAGAGG TAA
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Protein sequence | MNTARIVVLT IAVGAGGLAA YLASGSDKKP QPAQTAQLQT VDVLVAKSDI PLGQAVTAND VAWQAWPANS ASSSFIRRDQ RPDATTQLAG SIARSPFIAG EPIRELKLVS AKGSGFMAAI LPTGMRAIST EISPETGAGG FILPNDRVDV ILSQRDKNPD HPNANSVNSE TILSNVRVLA VDQTIEEKNG QKVVVGKTAT LELKPEQAEM LARSRQMGTL SLALRSLADA NAPESSTDDQ RRDSINIVRY GVPTQTTVQR
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