| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0387 |
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| Symbol | |
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| ID | 4030196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 428862 |
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| End bp | 429836 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637968916 |
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| Product | type II secretion system protein |
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| Protein accession | YP_575738 |
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| Protein GI | 92116009 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.88705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTGC AGACCCTCGC AATGGCATTC ATGGCTGCAA CCGCGGTTGG CGGCGTCGCA
TGGGTATTCC TGTATCCGGC GCTGTCGGGC GAGGCGAAGG CGGAGAAGCG CCGTTCGGCA
TTCGCGCGGA CAGCGCCGGC GGTCCGGCAG GTCGACAGAG CCCAGCGTTC GCGCCGCGAG
CAGATCGAGG GATCGCTGCG GGAAATCGAG CAACGCCAGA AGCGCGACAG CAAGATCACG
CTCAACGACC GCATCGCACA GGCAGGCCTG TCCTGGTCGA AGGAAAAATT TCTGATCGTC
TCCGGCATTT TCGGCGCGGT CTGTTTTGCC GTTCCAATGT TTTCGGGAGC CGGGCCGATC
GCCGCGGTCG GCCTTGCATT CGCGGCGGGC TTCGGCTTGC CGCGCTGGCT GCTGGGCTTC
CTCAAGACGC GCCGCGAGAA GGCGTTTCTG CGCGCGCTTC CCGATGCGGT GGACGTGATC
GTTCGCGGCA TCAAGGCCGG CCTGCCACTG TTCGAATCCA TCAAGGTGGT CGCGGCCGAC
TCGCCGGAGC CGCTGAAAAG CGAATTCGCG GCGATCATCG AAACGCAGGC GATCGGCATG
CCGCTCGGCG AGGCCTGTGC GCGGCTGTAC GAGCGGATGC CGGTTCCCGA AGCGAACTTC
TTCGGCATCG TGATCGCGAT CCAGCAGAAA TCCGGCGGCA ACCTGTCGGA AGCTCTCGGC
AACCTGTCCA AGGTGCTACG CGACCGCAAG AAGATGGCCG AGAAAATCCA GGCCATGTCG
ATGGAAGCCA AGGCGTCCGC CGCCATCATC GGCTCGCTGC CTCCCGTCGT CATGATGCTG
GTCTATCTGA CTACCCCGGA CTACATCGCA ATGCTTTGGA CCCATCCCAC CGGGCGGCTG
ATGCTGGCCG GCTGCGTATT GTGGATGTCG GCCGGCATCT TCGTGATGAA GAAAATGATC
AACTTCGACT TCTGA
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| Protein sequence | MNLQTLAMAF MAATAVGGVA WVFLYPALSG EAKAEKRRSA FARTAPAVRQ VDRAQRSRRE
QIEGSLREIE QRQKRDSKIT LNDRIAQAGL SWSKEKFLIV SGIFGAVCFA VPMFSGAGPI
AAVGLAFAAG FGLPRWLLGF LKTRREKAFL RALPDAVDVI VRGIKAGLPL FESIKVVAAD
SPEPLKSEFA AIIETQAIGM PLGEACARLY ERMPVPEANF FGIVIAIQQK SGGNLSEALG
NLSKVLRDRK KMAEKIQAMS MEAKASAAII GSLPPVVMML VYLTTPDYIA MLWTHPTGRL
MLAGCVLWMS AGIFVMKKMI NFDF
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