Gene Nham_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0383 
Symbol 
ID4030192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp424602 
End bp425447 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID637968912 
ProductNLP/P60 
Protein accessionYP_575734 
Protein GI92116005 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATC CGCGTCTCAC GCCGGCCCGG CCGGAGGTCG CCGCCCGCTA TCTCGAAGGC 
ACGATCGAGG CGGCACGCTT CGCCGATGGC GAGGAATGGG AGGTCGTTGA CGCGGTGGTA
CCGCTGCGGC GCCAGCCTTT GCCTGACGCC ATGCTCGACA CCCAGGCGCT GCGCGGCGAG
CGCGTCACGG TTTACGACCA CAACTCCGAA GGCTGGGCCT GGGGTCAATT GAACGGCGAC
GGCTATGTCG GCTGGCTGCC CGACCGCGCG CTCGCACGGC CCGGCGCGGC ACCGACACAC
AAGGTCATTG CCTTGCGGAC GTTTGCCTTT CCCGGGCCGT CGATCAAGCT GCAGCCGGCC
GAGACGCTGT CGCTCGGCGC CAGGCTGACC GTCCAGCGCC ATGACGGCGA CTTTGCCGTC
GCCGCCGGCC ATCTCCACAT ACCCGCCGTC CATGTCGCGC CGCTCGATGA CATCGCGGTG
GATTTCGTCA CGGTCGCCGA AATGTTCACC GGAACGCCGT ATCTGTGGGG CGGCAAGACC
AGCCTCGGTA TCGACTGCTC AGGGCTCGTG CAGGTGGCGC TCAACGCATC CGGCATCGGA
TGCCCGCGCG ACAGCGACAT GCAGGAGCGA GCCCTGGGCC GCACGCTATC TCCCGTGGAG
GCGCAACAGC CGCGGCGCGG CGATCTGATG TTCTGGAAAG GACACGTCGC CATCGTCCGC
GATGCGACCA CGCTGGTCCA CGCCAACGCC CATCACATGG CCACCGCCAT TGAGCGCATT
GACGAGGCGA TCACCCGCAT CAAGGCGGCG GGAAGTGAAG TGACGAGCGT GAAGCGGCTG
GATTGA
 
Protein sequence
MDDPRLTPAR PEVAARYLEG TIEAARFADG EEWEVVDAVV PLRRQPLPDA MLDTQALRGE 
RVTVYDHNSE GWAWGQLNGD GYVGWLPDRA LARPGAAPTH KVIALRTFAF PGPSIKLQPA
ETLSLGARLT VQRHDGDFAV AAGHLHIPAV HVAPLDDIAV DFVTVAEMFT GTPYLWGGKT
SLGIDCSGLV QVALNASGIG CPRDSDMQER ALGRTLSPVE AQQPRRGDLM FWKGHVAIVR
DATTLVHANA HHMATAIERI DEAITRIKAA GSEVTSVKRL D