Gene Nham_0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0382 
Symbol 
ID4030191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp422969 
End bp424600 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content64% 
IMG OID637968911 
ProductABC transporter related 
Protein accessionYP_575733 
Protein GI92116004 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCA TCGATCAGCC GCTACTCGAC GTTCGTGACC TGTCCGTTGC GTTTCACCAT 
GGCAGCGGAC CATCGGTTGC CGTCGATCGC ATTTCGTTCG AGATCAAACG CGGCGAGTGC
GTGGCGCTGG TCGGCGAATC CGGCTCTGGA AAATCCGTCA GCGCGCTCTC GATCCTGAAG
CTGCTGCCCT ATCCGGCTGC GTCGCACCCC AGCGGCAATA TCCGCTTCAA AGGCCGTGAG
CTGCTCGGCA TGTCCGAGCG CGAGATCAGG AGCATTCGCG GCAACGACAT CTCGATCATC
TTTCAGGAGC CGATGACCTC GCTCAATCCG CTGCACACCG TCGAAGCGCA GATCAGCGAG
ATAATGCTGC TGCACGGCGG GGTTCGCGGC GCGGCGGCGC GGCAGCGGAC CCTGGAACTG
CTGACACAAG TCGGCATTCC CGATCCGGAA ACCCGCCTCG CCAGCTATCC GCATCAATTG
TCCGGCGGCC AGCGCCAGCG CGTCATGATC GCAATGGCGC TCGCCAACGA ACCCGACCTT
CTGATCGCGG ACGAGCCGAC CACCGCGCTC GACGTCACCG TGCAGGCGCA AATCCTGGCG
CTATTGGCGG ATATTCGCGC CCGGCTCGGA ATGAGTCTGT TGTTCATCAC CCACGATCTC
GGCATCGTCC GCCGCATCGC CGACCGTGTT TGCGTCATGA ACGGCGGCAA GATCGTCGAG
AAGGGACCGG TCGAGCAGGT CTTTGAAGAG CCGCGCCATC CCTACACGCG CGAGCTTTTG
GCCGCCGAGC CGAAGCCCGA CCCTGCGCCG CCGCGGCCGG AGTCTCCGGT CGTGATCGCA
GCCGACGATC TCAAGGTCTG GTTTCCGATC CGGCGCGGCC TGTTGCGCAA GACGGTCGGC
CACATCAAGG CGGTCGACGG CGTGACGCTG AAGGTGCGCA AGGGCGAAAC GCTCGGCGTC
GTCGGCGAAT CCGGGTCCGG CAAGACCACG CTGGGGCTGG CGCTGTTGCG GTTGATCTCG
TCCGATGGCC CGATCGTGTT CCTGAGCAAG AACATCCAGG GTCTGCGTTT CAAGGCGATG
CGGCCGTTCC GCCGCGACAT GCAGATCGTG TTTCAGGACC CGTTCGGGGC GTTGAGTCCG
CGAATGTCGG TCGGCGATAT CGTGGCCGAG GGCTTGAGCG TGCATCAGCG ATCGCTTTCG
GACACTGAGC GCGAGGCGCG GGTGGTCAAG GCGCTGAAAG ATGTCGGGCT CGATCCTGCA
ACGCGCTTTC GCTATCCGCA CGAATTCTCC GGGGGCCAGC GCCAGCGCAT CAGTATCGCG
CGCGCCGTGG TGCTGGAGCC GAATTTCGTC GTGCTGGACG AACCGACCAG TGCGCTCGAC
ATGCTGTTCC AGGCGCAGAT GGTCGATCTC TTGCGCGACC TGCAGCGCAA GCGCGACCTG
ACCTATATGT TCATCTCGCA CGATCTGCGC GTGGTCGCCT CTCTTGCCAG CCATCTCATC
GTGATGCGGC ACGGCAAGGT GGTCGAGGAA GGGCCGGCGT CGCACCTGTT CAAGAATCCG
AAATCGGATT ACACGCGCGC GCTGTTTGCT GCCGCTTTCC GGCTGGAGAC CGCGCCGGGC
GAATCGAAAT AA
 
Protein sequence
MGAIDQPLLD VRDLSVAFHH GSGPSVAVDR ISFEIKRGEC VALVGESGSG KSVSALSILK 
LLPYPAASHP SGNIRFKGRE LLGMSEREIR SIRGNDISII FQEPMTSLNP LHTVEAQISE
IMLLHGGVRG AAARQRTLEL LTQVGIPDPE TRLASYPHQL SGGQRQRVMI AMALANEPDL
LIADEPTTAL DVTVQAQILA LLADIRARLG MSLLFITHDL GIVRRIADRV CVMNGGKIVE
KGPVEQVFEE PRHPYTRELL AAEPKPDPAP PRPESPVVIA ADDLKVWFPI RRGLLRKTVG
HIKAVDGVTL KVRKGETLGV VGESGSGKTT LGLALLRLIS SDGPIVFLSK NIQGLRFKAM
RPFRRDMQIV FQDPFGALSP RMSVGDIVAE GLSVHQRSLS DTEREARVVK ALKDVGLDPA
TRFRYPHEFS GGQRQRISIA RAVVLEPNFV VLDEPTSALD MLFQAQMVDL LRDLQRKRDL
TYMFISHDLR VVASLASHLI VMRHGKVVEE GPASHLFKNP KSDYTRALFA AAFRLETAPG
ESK