| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0378 |
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| Symbol | |
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| ID | 4030264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 416792 |
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| End bp | 418771 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637968907 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_575729 |
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| Protein GI | 92116000 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.296975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTTTC GCCAGGCCGC TCACACTTTG GCGGATCATG CGCTAGTCCC TCGACCGACA
GCTCGCAGGA AACCCGCATT GGCCTTCACC CGACGACGTC TCCTTCATGG CGGAGCCCTG
ATCGCAGCCG CTCCCGCGAT CAAAGTCCTG ACCGGCGCTT CACCCATCGA AGCAGCCCGT
GCGCAGGCTG CGCCGGTCGA TCTCAAGTGG CGGCACGGGC TTTCGCTGTT CGGCGACGTG
AAATATCCCG AAGGCTTCAA GCATTTCGAC TATGTCAATC CGGACGCGCC CAGCGGCGGC
GCAGTGCGGC AGATCGGGCT TGGCACCTTC GACAATTTCA ACCCTGTGGT GTCGGGCGTG
AAAGGCTCGA TCGCATTGGC AGTCGGGCTG ATCTACGAAT CGCTGACGTT GCCGTCGCTG
GACGAGGTTT CAACGGAGTA CGGCGCGCTC GCGGAGTCGG TCGCTTATCC CGACGACTTC
TCCTACGTGG TCTACCGGCT GCGCAAGGAA GCGAGGTGGC ACGACGGCAA GCCGGTGACG
CCGGATGACG TGATTTTCTC GCTCGATTCG CTCAAGATGC ATCACCCCCA ATACGCGGCT
TACTATCGTC ATGTGGTGAA GGCCGAAAAG ACCGGCGAGC GCGACGTCAC CTTCACCTTC
GACGCGCCGG GAAACCGCGA ACTGCCGCAG ATCGTCGGAC AACTGATGGT GCTTCCGAAA
CACTGGTGGG AAGGCACCGA TGATGCGGGC AAAAGGCGCG ACATTTCCGC GACCACGCTG
GAGCCGCCGC TCGGCAGCGC CGCCTACAGG ATCAAAAGTT TCGAGGCGGC GCGCTCGGTC
ACGCTGGAGC GGGTCAAGGA TTACTGGGGC CTGAATTCCA ACTTCAATGT CGGCCGCAAC
AACTTCGACG AATTGCGTTA CGACTATTTT CGTGACGGCA CCGTCGCGCT CGAAGCCTTC
AAGGGCGGCC AGGTCGATTG GCGCACGGAA AACAGCGCCA AGAACTGGGC CACGGCCTAC
GATTTTCCGG CGGTAAAGGA AGGCCGCGTC GTCCTGGAGG AATTTCCCAA TCGCAGTTCG
GGCGTGATGC AGGCGTTCGC GCCGAACATC CGCCGCGAGA AGTTTTCCGA TCCGCGGGTG
CGGCGGGCGC TGAACTTCGC GTTCGATTTC GAGACCATGA ACCAGCAACT GTTCTTCGGG
CAATACACGC GGATCGCGAG CTATTTCGAG GGCACCGAAC TGGCATCGAG CGGTCTGCCC
GAGGGTAGGG AGCTTGAAAT CCTCGAACCC GTTCGCGCCG AAGTTCCGCC CGAGGTGTTC
ACGGCACCCT ACAGCAATCC GGTCGGCGGC AGCTCGGAGG CGGTTCGCGC CAACCTGCGC
GAGGGTATGA AGCTCCTGAA GGACGCGGGT TACGAGGTGC GTGGCGGCAA GCAGGTTGAC
GGCAAGACCG GCGCGCCGTT CGAGATCGAA CTGCTGGCGG AAGACCCGAG CTTCGAACGG
GTCCTGCTGT CCTACAAGCC ATCGCTGGAA CGCATGGGGA TCACCGTCAG CATCCGGACG
ATCGATTCGA CGCAATACGA GAACCGGCTG CGGACCTGGG ACTTCGATAT GGTCGTCGCG
TCGTGGGGCG AATCGCTGTC GCCCGGCAAC GAACAGCGCG AGTTCTGGGG CTCGCGCGCG
GCGGACATGC CCGGATCGCG CAATATCGTC GGCATCAAGA ATCCCGCCAT CGACAAGCTG
ATCGAGCGCG TGATCTTCGC CACGGACCGC GCCGATCTCG TCGCTGCCAC TCACGCGCTC
GACCGGGTTC TTTTATGGAA TAACTATGTG GTGCCGCAGT GGACCTATTC GAAGGTGCGC
ACTGCGCGAT GGGATCGCTT TGGCCGGCCG GCCGAAATGC CGAAGTACGG TCTTTCGGCC
TTCCCGGCGC TGTGGTGGTA CGATGCCGGC AAAGCGGCCA AGGTCGGCAA TCGATCTTGA
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| Protein sequence | MVFRQAAHTL ADHALVPRPT ARRKPALAFT RRRLLHGGAL IAAAPAIKVL TGASPIEAAR
AQAAPVDLKW RHGLSLFGDV KYPEGFKHFD YVNPDAPSGG AVRQIGLGTF DNFNPVVSGV
KGSIALAVGL IYESLTLPSL DEVSTEYGAL AESVAYPDDF SYVVYRLRKE ARWHDGKPVT
PDDVIFSLDS LKMHHPQYAA YYRHVVKAEK TGERDVTFTF DAPGNRELPQ IVGQLMVLPK
HWWEGTDDAG KRRDISATTL EPPLGSAAYR IKSFEAARSV TLERVKDYWG LNSNFNVGRN
NFDELRYDYF RDGTVALEAF KGGQVDWRTE NSAKNWATAY DFPAVKEGRV VLEEFPNRSS
GVMQAFAPNI RREKFSDPRV RRALNFAFDF ETMNQQLFFG QYTRIASYFE GTELASSGLP
EGRELEILEP VRAEVPPEVF TAPYSNPVGG SSEAVRANLR EGMKLLKDAG YEVRGGKQVD
GKTGAPFEIE LLAEDPSFER VLLSYKPSLE RMGITVSIRT IDSTQYENRL RTWDFDMVVA
SWGESLSPGN EQREFWGSRA ADMPGSRNIV GIKNPAIDKL IERVIFATDR ADLVAATHAL
DRVLLWNNYV VPQWTYSKVR TARWDRFGRP AEMPKYGLSA FPALWWYDAG KAAKVGNRS
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