| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0363 |
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| Symbol | metH |
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| ID | 4030249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 397975 |
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| End bp | 401760 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968897 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_575719 |
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| Protein GI | 92115990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCA TGATCCAGGC GCTGCAGTTC GACGAAGCCG CGTTTCGCGG CGAGCGCTTC
AAGGATTTTC ACCGCGACGT GCGCGGCAAC AACGATCTTC TCATCCTCAC GCAGCCGAAG
GCAATCGAGG ACATCCACGC GCAATACCTG CGCGCCGGCG CCGACCTCGT CGCCGCCAAC
ACGTTCTCAT CCACCTCGAT CGCGCAGGCC GACTACGAGA TGTCGGACCT CGCCTACGAA
CTCAACCGCG AGGGCGCGAA ACTCGCGCGC GCCGCCGCGA TGCGCGTCAG CGCCGAGGAC
GGCAAGCCGC GCTTCGTCGT CGGCGCCATC GGTCCGACCA ACCGCACCGC GTCGATTTCG
CCCGACGTCG CCAATCCCGG CTATCGCGCC GTCACCTTCG ACGATCTGCG CAAGGCGTAC
GGCGAACAGA TCAACGGCCT GCTCGACGGC GGCGCCGACC TGCTGCTGGT GGAGACCATC
TTCGACACCC TGAACGCCAA GGCCGCGCTC TATGCCATCG CCGAAATCGG CGAGGCGCGC
GGCATCGACG TGCCCGTGAT GATCTCCGGC ACCATCACCG ACAAGTCCGG CCGCCTGCTG
TCGGGACAAC TCCCCGAAGC CTTCTGGAAT TCGATCCGAC ACGCAAAACC GATCACCGTC
GGTTTCAACT GCGCGCTCGG CGCCGAAGAC ATGCGCGCGC ATATCGCCGA CATCGGCCGT
GTCGCCGACA CGCTGGTCTG CGCCTATCCG AACGCGGGCC TGCCGAACGA ATTCGGCCAG
TACGACGAAA GCCCGGACTA TATGGCGCGG CTGGTCGGCG AGTTCGCAGC CAGCGGCCTC
GTCAACATCG TCGGCGGCTG CTGCGGCACC ACGCCGGATC ATATTGCCGC GATCGCCGCC
GCGGTCGCGC CGCACACGCC GCGCGTGATT CCCGCGATCG AGCCGCGGCT GCGGCTGTCC
GGCCTCGAAC CGTTCACGCT CACATCGGAC ATTCCCTTCG TCAACGTCGG CGAGCGCACC
AACGTCACGG GCTCCGCGCG CTTCCGCAAG CTGATCAAGG CCGACGACTA CGCCGCCGCG
CTGCAGGTCG CGCGCGACCA GGTCGAGAAC GGCGCGCAGA TCATCGACGT CAACATGGAC
GAGGGCCTGC TGGATTCGGA AGCGGCGATT GTGACGTTCC TCAACCTCGT GGCGTCCGAA
CCCGATATCG CCCGCGTCCC CATCATGGTG GACTCCTCGA AGTTCAGCGT GATCGAAGCC
GGACTGAAAT GCATTCAGGG CAAGCCGGTG GTGAATTCGA TCTCCATGAA GGAAGGCGAG
GAGAAGTTCA TCCGCGAGGC GACGATCGCG CGGCGCCACG GCGCCGCCGT GGTGGTGATG
GCGTTCGACG AAGTCGGGCA GGCCGATACG TTCGCGCGCA AGACGGAAAT CTGCAAGCGC
GCCTACGACA TCCTGGTCAA TCGTCTCGAT TTTCCGCCCG AAGACATCAT CTTCGATCCC
AACATCTTTG CGATCGCCAC CGGTCTTGAG GAGCACAACA ACTACGGCGT CGACTTTATC
GAGGCGACGG GCTGGATCCG TCAAAACCTG CCGCACGCGC ATATCTCGGG CGGCGTCTCC
AACCTGTCGT TCTCGTTCCG CGGCAATGAG CCGGTGCGCG AGGCGATGCA CTCCGTGTTC
CTGTATCACG CTATCAAGGC CGGCATGGAC ATGGGCATCG TCAATGCCGG ACAGATGATT
ATCTATGACG ACATCGACCC CGAGTTGCGC CAGACCTGTG AAGACGTCAT TCTCAATCGC
GACGCGGGCG CATCCGAACG GCTGCTGCAA CTGGCGGAAA AATTCCGCGG CGCGGGCAAG
GAAGCGAAGG AGAAGGATCT CTCCTGGCGC GAATGGCCGG TGGAGAAGCG GCTGGCACAC
GCGCTGGTCA ACGGCATCAC CGAATATATC GAGGAAGACA CCGAAGCCGT GCGTCTGACG
GTCGAGCGCC CACTCAACGT CATCGAGGGC CCGCTGATGG CGGGAATGAA CGTGGTCGGC
GACCTGTTCG GCGACGGCAA GATGTTCCTG CCGCAGGTGG TGAAATCCGC GCGCGTCATG
AAGCAGGCGG TCGCCTATCT GATGCCGTTC ATGGAGGAGG AGAAGGCGCG CAATCAGGCC
GCTGGCGTCG CCAGCGAAAG CAGCAATTCC GCCGGCAAGA TCGTGCTCGC CACCGTGAAG
GGCGACGTCC ACGACATCGG CAAGAACATC GTCAGCATCG TGCTCCAGTG CAACAACTAC
GAGGTGATCG ACCTCGGCGT GATGGTGCCG GCCGCCAAGA TCATCGAGAC CGCGAAGGCC
GAGAAGGCTG ATATCGTCGG CCTGTCCGGC CTGATCACGC CGTCGCTGGA CGAGATGGGC
CACTTCGCGG CCGAGCTGGA ACGGCAGGGC CTCGACCTGC CGTTGCTGAT CGGCGGTGCG
ACCACCAGCC GCGTCCATAC TGCGGTGAAG ATCGATCCGA ACTATCGCAA CGGCCCGGTG
GTGCACGTCA ACGACGCCAG CCGCGCCGTC GGCGTCGTCG CCTCGCTGAT GTCGCCGGAG
CGGCGCGAGG CTTACGCGGC CGGGGTACGC GCCGAATACG CCAAGATTTC CGCGGCGCAT
TTCCGCGCCC AGCAGGACAA GAAGCGGCTG CCGCTCGCCG CCGCCCGCGC CAATGCGGTG
CCGATCGACT GGAGCACCTA TCGCCCCGTC AAGCCGACAT TCCTCGGAAC CAAAGCCTTT
GCCGACTATC CGCTGGAAGA ACTGGTAGAG GTGATCGACT GGACGCCGTT CTTCCAGGTC
TGGGAACTGT CCGGACGGTA CCCTGCGATC CTCGACGACA AGGTGGTCGG CGAGACCGCG
CGCGCGCTCT ATGACGATGC CCGCAAGATG CTGGACCGCA TCGTCAAGGA AAAGTGGTTC
AAAGCCTCCG GCGTGATCGG CCTCTGGCCC GCCAACCGCA TCGGCGACGA TATCGCCGTC
TACAGCGACG AGACCCGCAC CACGCAGATC GCGACCTACC ACACCCTGCG CCAGCAGTTG
GAGAAGCGCG AGGGCCGTCA CAACGCCGCG CTGGCGGACT TCATCGCGCC GCAGGAGACC
GGCATCGCCG ACTATATCGG CGGCTTCGCC GTCACCGCCG GGATCGGCGA GGACGAAATC
GCCGTGCGTT TCAAGAACGC CAATGACGAC TACTCGTCCA TTCTGGTGAA GGCGCTGGCC
GACCGCCTGG CGGAAGCCTT CGCCGAACGG ATGCATCAAC GCGTGCGCAA GGAATTCTGG
GGCTACGCGC GGGACGAGGC GCTGACCAAC GATCAGCTCA TCAAGGAAGA CTATGTCGGC
ATCCGCCCCG CGCCCGGCTA TCCGGCGCAG CCCGACCATA CCGAGAAGGC TACGCTGTTC
CGCCTGCTCG ACGCGACGTG CTCGACCGGC GTCGAACTGA CCGAGAGCTT CGCGATGTGG
CCCGGCTCCT CGGTCTCCGG TCTCTATTAC AGCCATCCCG AGAGCCAATA TTTCGGCGTC
GGCAAGATCG AACGCGATCA GGTCGAGGAC TATGCCGCCC GCAAGGGTAT GGAGGTTGCC
GAGATCGAAC GCTGGCTGGC GTCGATCCTC AACTACATTC CCGGCCAGTC CGGAAAGGCC
GCCGCGACGC CGGTGCCGGC GCCGACGCCC GCCAACGACG CCTCCGCCGA CGTCGCCAAT
CATCCGCCGG GCTGCCAGTG CGCTGTGCAT TTGCAGCTTC GCAAGACCAA GGCGCGGGCG
GGCTGA
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| Protein sequence | MGTMIQALQF DEAAFRGERF KDFHRDVRGN NDLLILTQPK AIEDIHAQYL RAGADLVAAN
TFSSTSIAQA DYEMSDLAYE LNREGAKLAR AAAMRVSAED GKPRFVVGAI GPTNRTASIS
PDVANPGYRA VTFDDLRKAY GEQINGLLDG GADLLLVETI FDTLNAKAAL YAIAEIGEAR
GIDVPVMISG TITDKSGRLL SGQLPEAFWN SIRHAKPITV GFNCALGAED MRAHIADIGR
VADTLVCAYP NAGLPNEFGQ YDESPDYMAR LVGEFAASGL VNIVGGCCGT TPDHIAAIAA
AVAPHTPRVI PAIEPRLRLS GLEPFTLTSD IPFVNVGERT NVTGSARFRK LIKADDYAAA
LQVARDQVEN GAQIIDVNMD EGLLDSEAAI VTFLNLVASE PDIARVPIMV DSSKFSVIEA
GLKCIQGKPV VNSISMKEGE EKFIREATIA RRHGAAVVVM AFDEVGQADT FARKTEICKR
AYDILVNRLD FPPEDIIFDP NIFAIATGLE EHNNYGVDFI EATGWIRQNL PHAHISGGVS
NLSFSFRGNE PVREAMHSVF LYHAIKAGMD MGIVNAGQMI IYDDIDPELR QTCEDVILNR
DAGASERLLQ LAEKFRGAGK EAKEKDLSWR EWPVEKRLAH ALVNGITEYI EEDTEAVRLT
VERPLNVIEG PLMAGMNVVG DLFGDGKMFL PQVVKSARVM KQAVAYLMPF MEEEKARNQA
AGVASESSNS AGKIVLATVK GDVHDIGKNI VSIVLQCNNY EVIDLGVMVP AAKIIETAKA
EKADIVGLSG LITPSLDEMG HFAAELERQG LDLPLLIGGA TTSRVHTAVK IDPNYRNGPV
VHVNDASRAV GVVASLMSPE RREAYAAGVR AEYAKISAAH FRAQQDKKRL PLAAARANAV
PIDWSTYRPV KPTFLGTKAF ADYPLEELVE VIDWTPFFQV WELSGRYPAI LDDKVVGETA
RALYDDARKM LDRIVKEKWF KASGVIGLWP ANRIGDDIAV YSDETRTTQI ATYHTLRQQL
EKREGRHNAA LADFIAPQET GIADYIGGFA VTAGIGEDEI AVRFKNANDD YSSILVKALA
DRLAEAFAER MHQRVRKEFW GYARDEALTN DQLIKEDYVG IRPAPGYPAQ PDHTEKATLF
RLLDATCSTG VELTESFAMW PGSSVSGLYY SHPESQYFGV GKIERDQVED YAARKGMEVA
EIERWLASIL NYIPGQSGKA AATPVPAPTP ANDASADVAN HPPGCQCAVH LQLRKTKARA
G
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