Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0295 |
Symbol | |
ID | 4030566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 327478 |
End bp | 328680 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637968829 |
Product | hypothetical protein |
Protein accession | YP_575651 |
Protein GI | 92115922 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.690441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTAC CAGAAGACCG CTGCACGGCT CGGGCAGCGA GCTTTGAACA AATGCACTCG TACATCATCG GAAAATCCGG TGTCGGAAAA TCCACCTTCC TTGAAAATCA TGCCCTGGAG AACGAGGGCA GCTTTGCGTT CCTCGACCCG CACGGCGACA GCGCGGAAAA ACTGGCCGAC ACCATCGACT GCATATTCTG GGAGCCGTCG GACACGGAGC ACGTCATCGG GTTTAATGTC CTTGAGAATG TCCCAGAGCC TCAAAGACAT TTGGTGGCCG CGCAGGTCGT CTCGTCCTTT AAGGCGATAT GGGGCGATAG CTGGGGGCCG CGGCTGGAAT GGATACTCTA CAATTCCGTT TCTCTGCTCC TCGACAATAA CGGCTCTTTA TTGGACATCC CCAAGCTCCT CACAGATAGC GGGTATCTGT CGAAATGTCT CAGACCGCTG CACAAACGGC TTATAAAAAA CCCGACCGAC CATGCGGCCG GCGCGCGGCG CAATTTCTGG CTCTACGAAT TCGACGCACT CCAGCCCCGC GAACGCGCCG CCGCAATCAG CCCGGTCTTG AACAAAGTGG GCCAGCTTGC TGCCAACCCG GTGCTCTCCG GCATCCTGCG CCACAACACC ATCGACATTT CCCGCATCAT GAACCGGGGC CAGCGGCTGG TCGTCAATCT CTCGAAGGGC CAGCTCGGTG AGGAGCCGTC GCATTTGTTG GGCGCCCTTT TAGTCTCCGC GTTCGCGCAG GCGGCAGAAG GAAGGGCGAA TATTCCGTTT GCGGAGCGGC GGCCATTCAC GCTCTACGTG GATGAATTCC AGAACTTCGC CACCAACAAC TTTTCCCGTA TTCTCTCGGA GGCCCGCAAA TACCGGCTCG ATTTGGTGCT CGCCCACCAG TTTCTTGGGC AACTGCCTGA CCTATTGCGA CAGGCAGTAT TCGGCAACGT TGGCCGGTTC ATTAGCTTCA AGATCGGCAG CGAGGATGCG CCGGTTATTG CCCGGGAATT AGGTTTCCCC GCTACCGCCG AGGAATTGAT TGATCTGAAC CGGTTCGAGG CTTGGGAGCG CAGCACCAGC ATTATGCCCA AGCAATTCAA GACCGCAGCT CCAATAGCCG GCCGCGGCCG ATTAGCTGCG GTGCGACGAA GGACGTGGAG CCGCTACACA ACAGCAACTC GACTCTCCAA ACGCTCGTAC TGA
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Protein sequence | MSLPEDRCTA RAASFEQMHS YIIGKSGVGK STFLENHALE NEGSFAFLDP HGDSAEKLAD TIDCIFWEPS DTEHVIGFNV LENVPEPQRH LVAAQVVSSF KAIWGDSWGP RLEWILYNSV SLLLDNNGSL LDIPKLLTDS GYLSKCLRPL HKRLIKNPTD HAAGARRNFW LYEFDALQPR ERAAAISPVL NKVGQLAANP VLSGILRHNT IDISRIMNRG QRLVVNLSKG QLGEEPSHLL GALLVSAFAQ AAEGRANIPF AERRPFTLYV DEFQNFATNN FSRILSEARK YRLDLVLAHQ FLGQLPDLLR QAVFGNVGRF ISFKIGSEDA PVIARELGFP ATAEELIDLN RFEAWERSTS IMPKQFKTAA PIAGRGRLAA VRRRTWSRYT TATRLSKRSY
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