Gene Nham_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0288 
Symbol 
ID4030558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp319776 
End bp320243 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID637968823 
Productprotein tyrosine phosphatase 
Protein accessionYP_575646 
Protein GI92115917 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGC CGGCCCGCGT GCACAATCCC CAGTCGGTGC TGTTCGCCTG CGCGCACAAC 
AGCGTACGCT CGCCGATGGC GGCGAGCCTG TTGCAGCACA TGTTTCCGCG AACCCTGTAT
GTGAAATCCG CCGGCGTTCG GACCGGCCAG CTCGATCCGT TCGCTGTTGC CGTGATGGCC
GAACTCGGCC AGGACATTTC AAAACACCGG CCGATGACGT TTGAAGAAAT CGAGGACTGG
GAAGGCCTCA ACTTCGATCT CATCATCACG CTGTCGCCGG AAGCCCATCA CAAGGCGTTG
GAGTTGACGC GCACGATTGC CGCCGTTGTC GAGTATTGGC CGACGCCGGA TCCGACCAGT
ATCGAGGGCA ATCGCGAGCA GCGCATGCAG GCCTATCGCA ATGTCTGTGA CGGATTGCTG
TCGCGCATCC GCAAGCGTTT TGCGCGGGGC GGCGGTGTGG GCCTTTAG
 
Protein sequence
MAAPARVHNP QSVLFACAHN SVRSPMAASL LQHMFPRTLY VKSAGVRTGQ LDPFAVAVMA 
ELGQDISKHR PMTFEEIEDW EGLNFDLIIT LSPEAHHKAL ELTRTIAAVV EYWPTPDPTS
IEGNREQRMQ AYRNVCDGLL SRIRKRFARG GGVGL