| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0274 |
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| Symbol | |
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| ID | 4031154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 301267 |
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| End bp | 304776 |
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| Gene Length | 3510 bp |
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| Protein Length | 1169 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968810 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_575634 |
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| Protein GI | 92115905 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.41273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCACG ACTGGGGCGT GATCGCGGCC GCCATCGGCT ACATCGGCTT CCTCTTCCTG
GTCGCAAGCT ATGGCGACCG GGCCCCGAAG TTTGGCCGCG GCCCCGCCGG CCCGCTGATC
TATCCGCTGT CGCTGGCGGT GTACTGCACG TCGTGGACGT TTTTCGGTTC TGTCGGGCTC
GCGACCCGAA CCGGCCCCGA GTTTCTCGCG ATCTATGTCG GGCCGGTCCT GCTGATCGCA
TTCTGCACGC CGCTGCTGCG GCGGATCATC CAGTTGGCGA AATCGCAGAA CATCACGTCG
GTCGCCGATT TCATCGCCGC GCGCTACGGC AAGAGTCAGG CGGTGGCGGC AACCGTCGCC
GTCATCGCCA TGATCGGCTC GATTCCGTAT ATCTCGCTTC AACTCAAGGC GGTGGCCTCC
TCGCTCGGGA CCATCCTGAT CGACGACCAG GCGATCGCCA AAATTCCTGT CATCAACGAC
ATCGCACTGA TCGTAACGAT CGCGCTGGCC CTGTTCGCGG TGCTGTTCGG AACCCGGCAG
ACCGATGCGA CGGAGCATCA ACACGGCCTG ATGCTGGCGA TCGCGACCGA GTCGATCGTC
AAGCTGGTGG CGTTCATCGC CGCGGGCGTC TTCGTCACGT TCTGGATGTT CAGTCCCGTC
GAACTGGTCG AGCGCGCACT GAAATCGCCG GAGGCGATGC GGGCCATCGA GTACACGCCG
TCGATCGGCA ACTTCCTGAC GATGACGCTG CTGTCGTTTC TCGCGATCAT GCTGCTGCCC
CGGCAATTCC ATGTCAGCGT GGTGGAGAAC TCCAGCGACG CCGAGGTCGG CCGGGCGCGC
TGGCTGTTTC CGCTCTACCT GGTCGCCATC AATATCTTCG TTGTCCCGAT CGCGCTCGCA
GGCCTCGTCA CGTTCCCGTT CGGCAACAGC GACATGTATG TGCTGGCGCT GCCGATCGAG
GGCCAGTCCA GGTTGCTCAG CATCGCAGTG TTCATCGGAG GACTTTCAGC GGGAACCGCG
ATGGTGATCG TTGAATGCGT GGCGCTGGCG ATCATGGTGT CCAACGACAT TGTCGTGCCG
CTGGTGTTGC AGCGCAGTCC GGCGGCCCGT GGCGGCCGCA AGGACTTCGG CAACTTCCTG
CTCAAGACCC GCCGTCTTGC GATCTTCGCC ATCATGATCA TGGCGTATTT GTACTACCGC
GCGCTCGGCA GCGCACAGCT CGCCGCGATC GGGCTGCTGT CGTTCGCCGC CATCGCGCAA
CTCGCGCCGG TGTTCCTCGG CGGCCTGGTC TGGCGGCGTG CGACGGCGCG CGGCGCGATG
GGCGGGATGC TCGCCGGTTT CGCCGTCTGG GCCTACACGC TGTTTCTTCC GAGCTTGCTG
GACGGCACCA CCGTCGGCAC GATGCTGCTG CAACACGGCC CGTTCGGCAT CGGCGAACTG
AAGCCGCAGG CGCTGTTCGG CGTCAACCTG CCTCCGCTCA TGCACGGTGT GCTATGGAGT
CTGTCGCTAA ATGTCCTGAC CTACGTCGCG CTGTCGCTGA CGCGGCAACC ATCGTCGATC
GAGCGGGTGC AGGCGGGAAT CTTCGCGCCC CACGCGCTCG CGCCGCTGAC CCCGCCATTC
CGGCGCTGGC GTTCGATGGT GACGGTGCAG GATATTCTCG GCACCGTGGC ACAATACCTC
GGCCCCGAGC GCGCACGGCA GTCGTTCAAG GCGTTCGCCG CTGCGCGGCG CCTCAACCTC
GATCCGGCAG CGCCGGCCGA TTTCGAATTG CTGCAGCACG CCGAGCATCT GATCGCGTCG
TCGATCGGCG CGGCGTCGTC GCGACTGGTG ATCTCGCTGC TGCTGCGGCG TCGCACGGTG
TCGGCGAAGG CAGCCTTGAA GCTGCTCGAC GACGCCCACG CGGCGCTCCA CTTCAACCGC
GAGATGCTGC AGACCGCACT GAACCACGTG CGGCAGGGAA TCGCGGTGTT CAACACCGAT
CTGCAATTGA TCTGTTCGAA CCGACAATTC GGAAATATTC TCGGGCTGCC GCCGCAAATC
GTTCAGATCG GGATTCCGCT GACCGAAATT CTTGAATTCC TCGGCACCAT CGATAAGTCG
CAGATCGACC GGGAGGCTGC GAAGCAGACC CGTCTCACCG CATACACGAC GGAGGGACAG
CCGTATCTGG AGCGGCGTCC CGACCGCAAC ATCGTGATCG AGGTCCGCGC CAACCGGATG
CCCGACGGCG GCCTGGTGAT TACCTTCTCC GATGTGACCC CGAGCTTCGA GGCCGCCGAG
GCGCTTGAGC GCGCTAATGC CACGCTCGAA AAGCGCGTGC GTGACCGCAC CGAGGAACTG
ACCCGGCTGA ATTCCGAACT CGCGCGCGCC AAGAGCATCG CCGAAGAAGC CAACATCTCC
AAAACCCGGT TCCTGGCGGC CGCCGGCCAC GACATCCTGC AACCGCTCAA CGCCGCACGA
CTCTATGTCA CGAGCTTGGT GGAGCGGCGG AGCGGCGGAG AGGATTCCAG GCTGGTCCAG
AACATCGACG ATTCACTGGA GGCCATCGAG GAGATTCTCG GCGCGCTGCT CGACATCTCG
CGGCTAGACG CCGGCGCCAT CACGACGTCG ATCACGAGTT TCCGGGTCGG CGACCTGATG
CGCTCGCTCG AAATCGAGTT CGCTCCGATG GCGCGGGCGA GGCAGGTCCG CCTGACGTTC
GTGCCGAGTT CGCTGCCGAT CGCATCCGAC CGGATGCTGC TGCGGCGGCT GCTGCAAAAC
CTGATCTCGA ACGCCATCAA GTATACCCCG CACGGCCGCG TGCTGATCGG CTGCCGCAGA
CGCGGCGAAT CGCTCCGGAT CAACGTCTAT GACACCGGCG TCGGAATCCC GATCCTCAAG
CGCGGCGAAA TCTTCAAGGA ATTTCATCGG CTCGAACAGG GAGCGCGCAT CGCGCGGGGG
CTCGGGCTGG GGCTGTCGAT CGTCCAGCGG CTTGCGCGCG TGCTTGATCT GACCATCGCA
CTGGACTCAA ACCGCGGCGG CGGCTCGCTG TTCTCGGTCA CAATTCCGAT CGCACCGGCC
ATCAATCAGA CTGCCCATGC CACCGCGGTG ACCAGCAGCA CGCCGCTGTC GCACGCGCCG
ATGAGCGGGA CCCTGATCGT CTGCATCGAG AACGATCTGG CGATCCTCGA CGGCATGAAG
ACGCTGCTGA CATCCTGGGA TGCCCGCGTG ATCGCCGTCA CCGATCATGA GTCGGCGATC
GCGGCGATCG AAGCGGCCGG CGGACCGATC ACCGGGCTGC TGGTGGACTA TCATCTCGAC
CGCGGCAACG GCATCGCGAC GATCCGGGAG ATTCGACGGA AATTCGGCGA GACCATTCCG
GCGATCCTGA TCACGGCCGA CCGCAGCCCC CACGTTCGCG AAGCGGCGCA GCTGGAACGG
GTTTCAGTGC TCAACAAGCC GTTGAAACCG GCTTCGCTGC GGGCGCTGAT CGGCCAGTGG
CGAAGCCAGC AGATCGCCGC CGCGGAATAA
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| Protein sequence | MLHDWGVIAA AIGYIGFLFL VASYGDRAPK FGRGPAGPLI YPLSLAVYCT SWTFFGSVGL
ATRTGPEFLA IYVGPVLLIA FCTPLLRRII QLAKSQNITS VADFIAARYG KSQAVAATVA
VIAMIGSIPY ISLQLKAVAS SLGTILIDDQ AIAKIPVIND IALIVTIALA LFAVLFGTRQ
TDATEHQHGL MLAIATESIV KLVAFIAAGV FVTFWMFSPV ELVERALKSP EAMRAIEYTP
SIGNFLTMTL LSFLAIMLLP RQFHVSVVEN SSDAEVGRAR WLFPLYLVAI NIFVVPIALA
GLVTFPFGNS DMYVLALPIE GQSRLLSIAV FIGGLSAGTA MVIVECVALA IMVSNDIVVP
LVLQRSPAAR GGRKDFGNFL LKTRRLAIFA IMIMAYLYYR ALGSAQLAAI GLLSFAAIAQ
LAPVFLGGLV WRRATARGAM GGMLAGFAVW AYTLFLPSLL DGTTVGTMLL QHGPFGIGEL
KPQALFGVNL PPLMHGVLWS LSLNVLTYVA LSLTRQPSSI ERVQAGIFAP HALAPLTPPF
RRWRSMVTVQ DILGTVAQYL GPERARQSFK AFAAARRLNL DPAAPADFEL LQHAEHLIAS
SIGAASSRLV ISLLLRRRTV SAKAALKLLD DAHAALHFNR EMLQTALNHV RQGIAVFNTD
LQLICSNRQF GNILGLPPQI VQIGIPLTEI LEFLGTIDKS QIDREAAKQT RLTAYTTEGQ
PYLERRPDRN IVIEVRANRM PDGGLVITFS DVTPSFEAAE ALERANATLE KRVRDRTEEL
TRLNSELARA KSIAEEANIS KTRFLAAAGH DILQPLNAAR LYVTSLVERR SGGEDSRLVQ
NIDDSLEAIE EILGALLDIS RLDAGAITTS ITSFRVGDLM RSLEIEFAPM ARARQVRLTF
VPSSLPIASD RMLLRRLLQN LISNAIKYTP HGRVLIGCRR RGESLRINVY DTGVGIPILK
RGEIFKEFHR LEQGARIARG LGLGLSIVQR LARVLDLTIA LDSNRGGGSL FSVTIPIAPA
INQTAHATAV TSSTPLSHAP MSGTLIVCIE NDLAILDGMK TLLTSWDARV IAVTDHESAI
AAIEAAGGPI TGLLVDYHLD RGNGIATIRE IRRKFGETIP AILITADRSP HVREAAQLER
VSVLNKPLKP ASLRALIGQW RSQQIAAAE
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