| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0256 |
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| Symbol | |
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| ID | 4031004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 286019 |
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| End bp | 287632 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637968792 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_575616 |
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| Protein GI | 92115887 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.262463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAG CAACTGCTCA CGATCATGCG CACGACGACG ACCACGCGCA CCACCCGACC
GGGTGGCGGC GCTTTGCGTA TTCGACCAAT CACAAGGACA TCGGGACCAT GTACCTGGTG
TTCGCCCTCG TTGCGGGGCT CATCGGCGGC CTGATGTCGA TGGGCATCCG GGCGGAGCTG
ATGTTTCCCG GCGTGCAGGT TTTCCATCCT GCTCACGAGT ACAACGTGTT TGTGACCAAT
CACGGCCTGA TCATGATCTT CTTCATGGTG ATGCCGGCGA TGATCGGCGG CTTCGGCAAC
TGGTTCGTGC CGCTGATGAT CGGGGCGCCG GACATGGCGT TTCCGCGCAT GAACAACATC
TCGTTCTGGC TGCTGCCGGC GGCGCTTGCG CTGCTGCTGA TCTCGACGTT CGTGGAGGGC
GAGCCGGGCT CCAGCGGTGC TGGCACGGGC TGGACGCTGT ATCCGCCGTT GTCGACGAGC
GGTCATCCGG GTCCGGCGGT GGACTTCGGC ATTCTGTCGA TCCATCTGGC CGGTGCCTCC
TCGATTCTCG GCGCGATCAA CTTCATCACC ACGATCTTCA ACATGCGCGC GCCTGGCATG
ACCATGCACA AGATGCCGCT GTTCGTATGG TCGATCCTGG TCACCGTGTT CCTGCTGCTG
CTGGCGCTGC CGGTGCTGGC GGGCGCGATC ACGATGCTGC TGACCGATCG TAACTTCGGC
ACCACGTTCT TCGCTCCCGA TGGCGGCGGC GATCCGGTGT TGTTCCAGCA TCTGTTCTGG
TTCTTCGGTC ATCCCGAGGT GTACATCCTG ATTCTGCCCG GCTTCGGCAT GATCAGCCAT
GTGATCTCGA CCTTCTCGAA GAAGCCGATC TTCGGCTATC TCGGCATGGC CTATGCGATG
GTCGCGATCG GCGGCGTCGG CTTCGTGGTG TGGGCGCACC ACATGTACAC GGTCGGCATG
GTGTCGTCGG CGCAGGCCTA TTTCGTCGCG GCGACCATGG TGATCGCGGT GCCGACCGGG
GTGAAGGTGT TCTCGTGGAT CGCCACCATG TGGGGCGGCT CGATCGAGTT CAGGGCGCCG
ATGCTGTTTG CGATCGGCTT CATCTTCCTG TTCACGGTCG GCGGCGTTAC CGGCGTGGTG
CTGGCCAATG CGGGCGTCGA TCGCGTGATG CAGGAAACCT ACTACGTCAT CGCGCACTTC
CACTACGTGA TGGGCATTGC CGCGGTGTTC GCGATCTTCG CGGGCTGGTA CTACTGGTTC
CCGAAGATGT CCGGCTACAT GTACAACGAG ACCATCGCCA AGCTGCACTT CTGGTTGATG
TTCATCGGCG CCAACGTCCT GTTCTTCCCG CAGCACTTCC TCGGACTGCA GGGCATGATG
CGGCGCTCGG TCGACTATCC GGATGCGTTC GCGGGCTGGA ACGAGATCTC GTCCTACGGT
GCCTTCATCG CAGGGTCCGG CGTCCTGGTG TTCCTCTACG GCCTGATCGA TGCCTTCGCG
CGCAAGCAGA AGGCTGCGGA CAATCCGTGG GGTGAAGGCG CCACCACGCT GGAGTGGACG
CTGTCGTCGC CGCCGCCGTT CCACCAGTTC GGAACGCTGC CGAAGGTGCA GTAA
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| Protein sequence | MATATAHDHA HDDDHAHHPT GWRRFAYSTN HKDIGTMYLV FALVAGLIGG LMSMGIRAEL
MFPGVQVFHP AHEYNVFVTN HGLIMIFFMV MPAMIGGFGN WFVPLMIGAP DMAFPRMNNI
SFWLLPAALA LLLISTFVEG EPGSSGAGTG WTLYPPLSTS GHPGPAVDFG ILSIHLAGAS
SILGAINFIT TIFNMRAPGM TMHKMPLFVW SILVTVFLLL LALPVLAGAI TMLLTDRNFG
TTFFAPDGGG DPVLFQHLFW FFGHPEVYIL ILPGFGMISH VISTFSKKPI FGYLGMAYAM
VAIGGVGFVV WAHHMYTVGM VSSAQAYFVA ATMVIAVPTG VKVFSWIATM WGGSIEFRAP
MLFAIGFIFL FTVGGVTGVV LANAGVDRVM QETYYVIAHF HYVMGIAAVF AIFAGWYYWF
PKMSGYMYNE TIAKLHFWLM FIGANVLFFP QHFLGLQGMM RRSVDYPDAF AGWNEISSYG
AFIAGSGVLV FLYGLIDAFA RKQKAADNPW GEGATTLEWT LSSPPPFHQF GTLPKVQ
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