Gene Nham_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0254 
Symbol 
ID4031002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp284077 
End bp284637 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID637968790 
Productinvasion associated locus B 
Protein accessionYP_575614 
Protein GI92115885 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCCTT CGAAACGGCA TATCAGGCAT GCGCCAGGAC GCATAGCGGT TGCGAAACGT 
CAGCCGACCC GCGTGCTGAC GGGCTGGATC GCCGCCCTTA TCGTTCTGGG CTTTGCCGGC
GCAGCCTGCG CCCAGGGGGC CGTCAAATCA GTCCATGGCG ACTGGCAAAT CCGCTGTGAC
ACCCCGCCCG GCGCCAAAGC CGAGCAATGC GCGTTGATCC AGAGCGTGGT GGCGGAGGAC
CGCTCCAACG CCGGCCTGAC CGTGATCGTG CTCAAGACCG CCGACCAGAA AAGCCGGCTG
ATGCGGGTGG TGGCGCCGCT CGGCGTGCTG CTGCCCTCCG GTCTCGGCCT GAAACTCGAC
AACGTCGACG TCGGCCGCGC CGGGTTCGTG CGCTGCCTGC CCAACGGCTG CGTCGCCGAG
GTCGTGCTGG ACGACAAACT GCTGGGGCAG TTGCGTAGCG CCAAGACGGC GACGTTCATC
ATCTTCGAAA CGCCCGAGGA AGGCATCGGC TTCCCGCTCA GCCTGAACGG GCTCGGCGAA
GGTTACGACA AGCTGCCGTA G
 
Protein sequence
MRPSKRHIRH APGRIAVAKR QPTRVLTGWI AALIVLGFAG AACAQGAVKS VHGDWQIRCD 
TPPGAKAEQC ALIQSVVAED RSNAGLTVIV LKTADQKSRL MRVVAPLGVL LPSGLGLKLD
NVDVGRAGFV RCLPNGCVAE VVLDDKLLGQ LRSAKTATFI IFETPEEGIG FPLSLNGLGE
GYDKLP