| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0248 |
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| Symbol | |
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| ID | 4030996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 275056 |
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| End bp | 278316 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637968784 |
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| Product | Sel1-like |
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| Protein accession | YP_575608 |
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| Protein GI | 92115879 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCGC GCGGATCGTG GAGCGAAGAC GGGATCGAAC CATCCGTTCG CGAGCGGGCC
GAAGCCGCTG CGCGGCGCGC CGGCGTGTCC CTGAACGAGT GGCTCAGTTC CACGGTCGGC
GGCGCCATGC CGGATTCCCG GTTGGCGCAG TCCCCGGTCC CGAGCCAAGA CAGCCACCAG
GACAACCACG ACGTCGCGGA CATCCATCAG CGGCTCGATT CCATCACCCG CCAGATCGAT
CAGTTGTCGA GTCCGGCCAC GCGCGGCGAA CCCGCCGTCG CCCGCCAGCT CAACGACGCC
ATTTCGCGGC TCGATGCCCG GCTCGCCCGG GTCTCCGCCC AGGCACCCGC AGATGACTCG
CAGCACCGCG CCGACAGGGT CGAGCGCGCC GCAGCCGAGG TCTACAGCCG GTCGCCGAGG
CCCGATGTCG CCTCGCTCGA ATTCGCGATC GCGGAAGTCG CCGCGCGCCA GCATGAGCTC
GACGGCGCAG GCGCGATGCC GCCGCGCAGT TCACCGCCGG TCGTGCCGGC GATGACAACG
TCGCGGCCGG CGCCGGATTT TTCCGGCCTC GAACAGCAAC TCTTCAAGAT CACGAGCCAG
ATCGAATCGC TGCAGCGCCC GGACGGGATC GAGCAGTCGA TCGCCGCATT CCGCAGCGAG
CTTGCCGGCA TTCGTCACGT CATTACCGAG GCGTTGCCAC GCCGCGCGAT CGAATCGATC
GAAAACGAGA TTCGCTCGCT ATCGCAGCGC ATCGACGACG TCCGCCAAAA CGGCAGCGAT
GGCCAGGCGC TGGCGAATAT CGAACGCGCC CTCAATGAGA TCTACGACGC GCTGCGATCG
CTGAAACCGG CGGAACAGCT TGCAGGATTC GACGAGGCGA TCCGCAATCT CGGCAACAAG
ATCGATACGA TCGTGCGCAG CAGCGGCGAC AGCGGCATGA TGCAGCAGCT CGAGAACGCG
ATCGGCGCGC TTCGCGGCAT CGTCTCCAAC GTCGCCTCCA ACGATGCGCT GGCGCGGCTC
AGCGACGATC TCACCCTGCT GTCGTCGAAA GTCGATCAGC TCGGTCGATC CGAGGGCAAC
AGCGATTCGT TCGCCGCGCT CGAACAGCGC GTCGTCGCCG CGCTGACGGC GACCCTGGAA
AACCGCGAAC GTCCCGCCTC CGGCGGCAGT TCCGAGCAGC TTGAAGAGGC GGTGCAGGCG
CTGTCCGACC GTCTCGACAG TTTGCCGGCC GGCCACGACT CGTCATCGGC GCTGGCGCAT
CTCGAACAAC GGGTCTCGCT GCTGCTCGAA CGCCTGGAGA CCGCCGGCGG TCATTCGGGA
ACCAATCTCG CAGGAACCAA CCTCGGGCGC GTCGAGGAAG GCTTGCAGGA CATCCTGCGC
CACCTGGAAC GGCAGCAGGC CGGGCTCGCG GCGCTGACCG AAAGCGGCCC GCGCAGCACC
GGCCCGACCA TGGACAGCGA GGTCGTCGAG GCGATCAAGC GCGAACTGTC CGAGATGCGA
TTCTGCCAGT CGGAAACCGA CCGCCATACT CAGGATTCAC TCGAGGCCGT TCACAACACG
CTCGGGCATG TGGTCGATCG ACTGGCGATG ATCGAAGGCG ACCTGCGCGC GGTCCGTGCG
ATGCCTGCGG CCCAGGCCGG GCCAGCTCGC GGCGCGATAC CGGAACCGCC GGCGGGTCTG
CCGCCAAGGC CCGAATTGCC GAACCCCGTG CTGTCGCAGA TGGCGGCGCC GCAGCCCGCT
GCGGCAGCGT CGGCATCAGC GTCGATCCCG CCGCGCGCGA TCGGCGACAT CCTGATTTCG
AGAGACACCT TCGACCCGGG GCACGGCCCG CAATCCGCAA CCGTGCGCCC GCCGCAACCG
CGCCCCGCGA TCGATCCGGA CCTGCCGCCC GATCATCCGC TGGAACCCGG CACCCGTCCG
GAGGGACGCC CGGCGTCGCC GTCGGAGCGT ATCGCTGCCT CCGAAAGCGC GATCGGCGAC
ATCGCCGAAC CGCCGCGCGA GCAATCGGGT TCATCATTCA TTGCTGCGGC GCGCCGGGCC
GCGCAGGCGG CGGCCGCCGC GGCGCCGTCG TCCGACAAGG CTGGCCGGAC CAAGGTCGCC
ATCGAACCGG CGCGGCCCGC CACAGGCGGG TCCAGTATCA CCTCCAAGAT CCGCTCGCTG
CTGGTCGGAG CGAGCGTGGT GGCGATCGTG CTCGGCAGTT TCCAGCTCGC AATGTCGCTG
TTCGATGGAA CCTCGCGCAC GGCCGTCAGC GAGACCAGCC CGGTCGCCGC GACCGCGGCA
AAGCCGCCGG CCGACGCCGA AGCCGCACCC GCACCCGCGA CCGCGATTCC GGCGATGCCG
TCGATGACCT CGCCGACGCC GATCGACCGC CAGTCGATGA TTTCGCCGCC GTCCGGCGGC
AGCGTGGCTC CGGCCGAATC CCCATCGGAC ACGGCGCCAT TGAGCCGGCC GGAGACCGCA
TCCACTGAGG TCACCGGCAC GATCCCGGTC GCGCCCACAT CCGTCCCGCT CGAGCGGGTC
GCAATTCCCC GTTCGGAATC CCTTCCCGAC AGCATCGGCG GCCCAATGTT GCGGACCGCC
GCGCTCCACG GCGACGCCGC GGCGGCGTTT GAAGTCGGCG TCCGCTATGC CGAAGGCAAA
GGCGTTGCCG TCAATTACGA CGAAGCCGCG AAATGGTACG ATCGCGCGGC GCAGGCCGGC
GTCGTGCCCG CCATGTTCAG GCTCGGCACC CTGCACGAAA AGGGCCTCGG CGCGAGCAAG
GACGTCGATG CGGCGCGGCG CTATTACATG CAGGCGGCCG AGCGGGGCAA TGCCAAGGCG
ATGCATAACC TCGCCGTGCT CGACGCCGAC GGCGGCGGCA AGGGCGCCAA CTACACGAGC
GCGGCGCAAT GGTTCCGCAA GGCGGCCGAG CGGGGCGTCG CCGACAGCCA GTTCAATCTC
GGCATCCTCT ATGCCCGCGG CATCGGCATC GAACAGAACC TGGCGGAATC CTACAAGTGG
TTCAGCCTCG CCGCCGCCCA GGGCGACGCG GATTCCGCGC GCAAGCGCGA CGAGGTCGCC
AAGCGCCTCG ATCCGCAGTC GCTTGCCGCG GCCAGGCTGG CGGTCCAGAC GTTCACCCCC
AAGCCCCAGC CCGACGATGC CGTCAAGGTC GTAAGCCCCG CCGGCGGATG GGACGGCGCA
GCCGCCATGC CCCAGGCCAA AACCAAGACG GCCCGGTCCG CGACGGCCAA ATCTGCGATG
GCCAAGCAGG CCGTGCGTTA A
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| Protein sequence | MNSRGSWSED GIEPSVRERA EAAARRAGVS LNEWLSSTVG GAMPDSRLAQ SPVPSQDSHQ
DNHDVADIHQ RLDSITRQID QLSSPATRGE PAVARQLNDA ISRLDARLAR VSAQAPADDS
QHRADRVERA AAEVYSRSPR PDVASLEFAI AEVAARQHEL DGAGAMPPRS SPPVVPAMTT
SRPAPDFSGL EQQLFKITSQ IESLQRPDGI EQSIAAFRSE LAGIRHVITE ALPRRAIESI
ENEIRSLSQR IDDVRQNGSD GQALANIERA LNEIYDALRS LKPAEQLAGF DEAIRNLGNK
IDTIVRSSGD SGMMQQLENA IGALRGIVSN VASNDALARL SDDLTLLSSK VDQLGRSEGN
SDSFAALEQR VVAALTATLE NRERPASGGS SEQLEEAVQA LSDRLDSLPA GHDSSSALAH
LEQRVSLLLE RLETAGGHSG TNLAGTNLGR VEEGLQDILR HLERQQAGLA ALTESGPRST
GPTMDSEVVE AIKRELSEMR FCQSETDRHT QDSLEAVHNT LGHVVDRLAM IEGDLRAVRA
MPAAQAGPAR GAIPEPPAGL PPRPELPNPV LSQMAAPQPA AAASASASIP PRAIGDILIS
RDTFDPGHGP QSATVRPPQP RPAIDPDLPP DHPLEPGTRP EGRPASPSER IAASESAIGD
IAEPPREQSG SSFIAAARRA AQAAAAAAPS SDKAGRTKVA IEPARPATGG SSITSKIRSL
LVGASVVAIV LGSFQLAMSL FDGTSRTAVS ETSPVAATAA KPPADAEAAP APATAIPAMP
SMTSPTPIDR QSMISPPSGG SVAPAESPSD TAPLSRPETA STEVTGTIPV APTSVPLERV
AIPRSESLPD SIGGPMLRTA ALHGDAAAAF EVGVRYAEGK GVAVNYDEAA KWYDRAAQAG
VVPAMFRLGT LHEKGLGASK DVDAARRYYM QAAERGNAKA MHNLAVLDAD GGGKGANYTS
AAQWFRKAAE RGVADSQFNL GILYARGIGI EQNLAESYKW FSLAAAQGDA DSARKRDEVA
KRLDPQSLAA ARLAVQTFTP KPQPDDAVKV VSPAGGWDGA AAMPQAKTKT ARSATAKSAM
AKQAVR
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