| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0239 |
|---|
| Symbol | |
|---|
| ID | 4030010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 264818 |
|---|
| End bp | 266176 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968775 |
|---|
| Product | putative outer membrane protein |
|---|
| Protein accession | YP_575599 |
|---|
| Protein GI | 92115870 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TTTTGCTTGG CGTTCTGCTG GCCGGCACTG CGATGAGCGC CCAGGCGGCC
GATCTCGCAC CGCGTCCCTA CACCAAGGCT CCAGTGATGG CCCCAGTCTA TGACTGGACC
GGCTTTTACC TCGGCGTGAA CGCCGGCCTC GGGCTTGGCC GCGACCGGAC CGTGAATGAT
TTCGGCGACG GCACGGGAAA TTCAACGTAT CTGCAGCCGC TCGGCGCCAT CGGCGGCGGC
CAGATCGGCT ACAACTGGCA GACCAATTCG TTCCTGGGTC CTCTGGTGCT CGGCGTCGAA
GCCGACATCC AGGGTGCGGA CATGACCGAC AATCGGACCA ACATAAACGG CGTGCAATAC
AACCAGAAAC TCGACTGGTT CGGCACGGCG CGCGGCCGCA TCGGTCTGGT CAACGGCCCG
ACCCTGACTT ACCTGACCGG CGGCTACGCC TACGGCAATG TCAGCACGAG GGGGGTCGCG
GACGGGGTGC CGTTCGCGTT CAGCGGCAAC CGCAGCGGCT GGACCTGGGG CAGCGGCGTC
GAAGCCGCGC TCGGCGGTAA CTGGACCGGC AAGATCGAGT ACCTCTATGT CGATCTCGGC
AACCGCACCG ACGTGTTCGA CGGCGGCGCC CAGGCGCTGC ACTCCGAACT GCGCGAGAAT
ATCTTCCGCG CCGGCCTGAA CTATCGCATC GGCGGCAACA GCACCTATGC CCCGGTCGCG
ACCGCCAACT GGAACGGATT CTATCTCGGC GGCAATGTCG GCTCCGGCAC CGGCCGCGAT
CGCACCACGG TTACCAACCT TGCCACCGGC GAAAGCGCGG CGTTCAATCT CGCGCCCGAC
GGTTTCATCG GGGGCGTGCA GGCCGGCTAT AACTGGCAGG CCGGCAACAT CGTCTATGGC
CTCGAGACCG ACTTCCAGGG CTCGACGATG GAGGACAACA AGACCTGCAT CGGCTGCGAA
CCGGGCGCCT CGCTCAACTT TAATGCGAAG CTGCAGTGGC TCGGCACCGT GCGCGGCCGT
CTCGGCTACG CGGTCGGCCC GTCGCTGTTC TACGCCACCG GCGGTTTCGC CTACGGCAAC
GTCAAGACCG CGATCAATGA GGTGAACTTC TCGGATACCC GTACCGGCTG GACCGTCGGC
GGCGGCATCG AGACGCCCTT CACCCTGTTC GGCCTGTTCG GCCCGAACTG GACCTCGACG
ACCGAATATC TCTACGTCGA CCTCGGCAAG TCCACCAACG GCTTTACGCT CGCCAATACC
ACGGGCGAGC CTGGCGCGCT GCAGACAGGC GTGCAGGAGC ACATCTTCCG CACCGGCCTG
AACTATCACT TCAATACGCC GGTGGTTGCG AGATACTGA
|
|---|
| Protein sequence | MKRILLGVLL AGTAMSAQAA DLAPRPYTKA PVMAPVYDWT GFYLGVNAGL GLGRDRTVND
FGDGTGNSTY LQPLGAIGGG QIGYNWQTNS FLGPLVLGVE ADIQGADMTD NRTNINGVQY
NQKLDWFGTA RGRIGLVNGP TLTYLTGGYA YGNVSTRGVA DGVPFAFSGN RSGWTWGSGV
EAALGGNWTG KIEYLYVDLG NRTDVFDGGA QALHSELREN IFRAGLNYRI GGNSTYAPVA
TANWNGFYLG GNVGSGTGRD RTTVTNLATG ESAAFNLAPD GFIGGVQAGY NWQAGNIVYG
LETDFQGSTM EDNKTCIGCE PGASLNFNAK LQWLGTVRGR LGYAVGPSLF YATGGFAYGN
VKTAINEVNF SDTRTGWTVG GGIETPFTLF GLFGPNWTST TEYLYVDLGK STNGFTLANT
TGEPGALQTG VQEHIFRTGL NYHFNTPVVA RY
|
|---|
| |