Gene Nham_0233 details

Gene Information

• Locus tag: Nham_0233
• ID: 4030004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 257533
• End bp: 258225
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637968769
• Product: beta-lactamase-like
• Protein accession: YP_575593
• Protein GI: 92115864
• COG category: [R] General function prediction only
• COG ID: [COG0491] Zn-dependent hydrolases, including glyoxylases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCAAG AGAACCAACA AGAGAACCAA CCCGACGACC AGAGCGCTGC GAAAGCCGGC 
GTCACCATCA TCCCGGTGAC GCCGTTCCGC CAGAACTGCA CGCTGTTGTG GTGCGAAACC 
ACTAGGGACG CCGTGGTCAT CGATCCCGGC GGCGATGTTC CGCTGATCAG GACCTCGATC 
GAACAGAGCG GCGTGACCGT CAGGCGGATC TGGCTCACCC ATGGCCACAT CGATCATGTC 
GGCGGCGCCG CGGAATTGCG CGACGCGCTG AAAGTCCCGA TCGAGGGGCC GCATATCGCC 
GATAAATTCC TGCTCGATCA TGTGGTCGAG AGCGGACGTG GCTACGGCAT GACCGGGATG 
CGCAATTTTA CGCCGGACCG TTGGCTCGAG GAGGGCGAGA AGGTCAAGAT CGGCGAACTC 
GAATTCGACG TCCTTCATTG CCCCGGCCAC TCGCCGGGCA GCGTGGTTTT TTTCAACAGG 
GAGATGCGCT TCGCGCATGT CGGCGACGTT CTGTTCAACG GCTCCGTCGG CCGCACCGAC 
CTGCCCGGCG GCAGTCACGC CACGCTGATC AAATCCATCA CCGACAAGCT GCTGCCGCTC 
GGCGACGACG TCGCTTTCAT CTGCGGACAC GGCCCGGGAT CGAGTATCGG CCACGAGCGC 
GCGAGCAACC CGTTCCTGAC CGACGGGATG TGA 

 

Protein sequence

MAQENQQENQ PDDQSAAKAG VTIIPVTPFR QNCTLLWCET TRDAVVIDPG GDVPLIRTSI 
EQSGVTVRRI WLTHGHIDHV GGAAELRDAL KVPIEGPHIA DKFLLDHVVE SGRGYGMTGM 
RNFTPDRWLE EGEKVKIGEL EFDVLHCPGH SPGSVVFFNR EMRFAHVGDV LFNGSVGRTD 
LPGGSHATLI KSITDKLLPL GDDVAFICGH GPGSSIGHER ASNPFLTDGM